Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N02
         (275 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   0.69 
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   1.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   1.6  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    22   3.7  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        21   8.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +1

Query: 25  VYRTGCASCAGCWSSTYTRRGCRRSTSAANSLTLIRRYT 141
           ++  GC     CW   Y  R  R     A+ +T + R++
Sbjct: 194 LHGAGCTPERLCWELHYLERCLRARIETASDITSVLRFS 232


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LSPPWIRRVDDSLTRMR 264
           L+ PW +  DDSLTR +
Sbjct: 335 LNIPWYKPEDDSLTRWK 351


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +1

Query: 55  GCWSSTYTRRGCRRSTSAANSLTLIRRYTC 144
           GCW S   +  C  +   + + T  R + C
Sbjct: 115 GCWGSNDDQESCSSNECVSTTETPTRHFFC 144


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 111 EFAHTDPKVYVSTILEVHKKYNALVLVAFIYDSGFV 218
           EF H    +Y     EV KK N    +  + D+G +
Sbjct: 25  EFNHIVTSIYDPADFEVLKKVNPQHTIPTLVDNGHI 60


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 243 VHTPYPGRRQN 211
           VH P+ G+RQN
Sbjct: 25  VHGPFQGQRQN 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,335
Number of Sequences: 2352
Number of extensions: 4972
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16167927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)