Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N02
         (275 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              20   6.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   6.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   8.6  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 90  QAIDKCGEFAHTDPKVYVSTILEVHKKYNAL 182
           Q + +C   +  +  + +S ILE   KY  +
Sbjct: 99  QLLAECSPISDPNALIKISKILECFFKYKTI 129


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 3   TRYSLVARIPDGLCELRRL 59
           T Y  V  + DG+ EL +L
Sbjct: 333 TEYQAVKEMHDGIAELIKL 351


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 113  FAALVDRLQPLRVY 72
            +AAL+D L+P   Y
Sbjct: 965  YAALIDELKPATRY 978


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 113  FAALVDRLQPLRVY 72
            +AAL+D L+P   Y
Sbjct: 961  YAALIDELKPATRY 974


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,644
Number of Sequences: 438
Number of extensions: 1215
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)