Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M24
(284 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kin... 28 4.8
BC091514-1|AAH91514.1| 671|Homo sapiens sorbin and SH3 domain c... 28 4.8
BC067260-1|AAH67260.2| 671|Homo sapiens sorbin and SH3 domain c... 28 4.8
AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kin... 28 4.8
AF037261-1|AAC09244.1| 671|Homo sapiens SH3-containing adaptor ... 28 4.8
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein. 28 6.3
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni... 28 6.3
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte... 28 6.3
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto... 28 6.3
DQ104739-1|AAZ13596.1| 1120|Homo sapiens brain adenylate cyclase... 27 8.3
>BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 14 VELRDNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELA 133
+++RD R +V V G E+FYST H + LA
Sbjct: 1378 IQIRDKRKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLA 1417
>BC091514-1|AAH91514.1| 671|Homo sapiens sorbin and SH3 domain
containing 3 protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 102 MPAAQKVSNWPGTWTTKRPRR 164
+PA+Q NW TWT RR
Sbjct: 94 IPASQHTQNWSATWTKDSKRR 114
>BC067260-1|AAH67260.2| 671|Homo sapiens sorbin and SH3 domain
containing 3 protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 102 MPAAQKVSNWPGTWTTKRPRR 164
+PA+Q NW TWT RR
Sbjct: 94 IPASQHTQNWSATWTKDSKRR 114
>AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kinase 2
protein.
Length = 2527
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 14 VELRDNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELA 133
+++RD R +V V G E+FYST H + LA
Sbjct: 1378 IQIRDKRKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLA 1417
>AF037261-1|AAC09244.1| 671|Homo sapiens SH3-containing adaptor
molecule-1 protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 102 MPAAQKVSNWPGTWTTKRPRR 164
+PA+Q NW TWT RR
Sbjct: 94 IPASQHTQNWSATWTKDSKRR 114
>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
Length = 1566
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 26 DNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELARDLDYKAAASWIGHPYFDVIDNSS 205
+N Y +++ A G+ S +H +GV+ DL + S G YFD S
Sbjct: 817 ENPYTDPADLIADAAGSPSSDSPTNHFFH-DGVDFNPDLLNSQSQSGFGEEYFDESSQSG 875
Query: 206 DFD 214
D D
Sbjct: 876 DND 878
>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
protein.
Length = 1581
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 26 DNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELARDLDYKAAASWIGHPYFDVIDNSS 205
+N Y +++ A G+ S +H +GV+ DL + S G YFD S
Sbjct: 832 ENPYTDPADLIADAAGSPSSDSPTNHFFH-DGVDFNPDLLNSQSQSGFGEEYFDESSQSG 890
Query: 206 DFD 214
D D
Sbjct: 891 DND 893
>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP205
protein.
Length = 1566
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 26 DNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELARDLDYKAAASWIGHPYFDVIDNSS 205
+N Y +++ A G+ S +H +GV+ DL + S G YFD S
Sbjct: 817 ENPYTDPADLIADAAGSPSSDSPTNHFFH-DGVDFNPDLLNSQSQSGFGEEYFDESSQSG 875
Query: 206 DFD 214
D D
Sbjct: 876 DND 878
>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP220
protein.
Length = 1581
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 26 DNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELARDLDYKAAASWIGHPYFDVIDNSS 205
+N Y +++ A G+ S +H +GV+ DL + S G YFD S
Sbjct: 832 ENPYTDPADLIADAAGSPSSDSPTNHFFH-DGVDFNPDLLNSQSQSGFGEEYFDESSQSG 890
Query: 206 DFD 214
D D
Sbjct: 891 DND 893
>DQ104739-1|AAZ13596.1| 1120|Homo sapiens brain adenylate cyclase 8
protein.
Length = 1120
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 5 EDNVELRDNRYNHIVHMVSAANGAEDFYSTEDHACRSEGVELARDLD 145
+DN EL Y+ + M ++ G DFYS + ++GVE R L+
Sbjct: 837 QDNEELYSQSYDAVGVMFASIPGFADFYSQTE--MNNQGVECLRLLN 881
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,599,040
Number of Sequences: 237096
Number of extensions: 620038
Number of successful extensions: 5729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5729
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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