Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M24
         (284 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   0.55 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   1.7  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   6.8  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 65 QPTPYARCDYICYHAIPRY 9
          Q  PY R ++ CY+++ R+
Sbjct: 6  QECPYCRRNFSCYYSLKRH 24


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 197 NSSDFDKKMNGLIACVCQKIGIDTGDRLS 283
           NS +  KK+    ACV QK+    G+ L+
Sbjct: 44  NSEEQMKKLGCFEACVFQKLHFMDGNTLN 72


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 197 NSSDFDKKMNGLIACVCQKIGIDTGDRLS 283
           NS +  KK     ACV QK+    G+ L+
Sbjct: 44  NSEEQMKKFGCFEACVFQKLHFMDGNTLN 72


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 2   HEDNVELRDNRYNHIVHMVSAANGAEDFYSTE 97
           H D++  R    + IVH  ++AN      S E
Sbjct: 731 HRDSLSPRVENRSAIVHSEASANANSSTSSEE 762


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,808
Number of Sequences: 438
Number of extensions: 989
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)