Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M21
(417 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase... 34 0.087
AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p pro... 34 0.087
AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA... 34 0.087
U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial ... 32 0.35
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 30 1.1
AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH0604... 29 1.9
AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA... 29 1.9
AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p pro... 29 2.5
AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB... 29 2.5
AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA... 29 2.5
BT021393-1|AAX33541.1| 1322|Drosophila melanogaster LD15043p pro... 28 4.3
AY051507-1|AAK92931.1| 826|Drosophila melanogaster GH15731p pro... 28 4.3
AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3 pr... 28 4.3
AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2 pr... 28 4.3
AE014298-649|AAF45963.3| 1305|Drosophila melanogaster CG12179-PA... 28 4.3
AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB... 28 4.3
AE014298-647|AAF45961.3| 981|Drosophila melanogaster CG12184-PA... 28 4.3
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA... 27 10.0
>U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase
gamma protein.
Length = 1145
Score = 33.9 bits (74), Expect = 0.087
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 230 PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE-STGMHIAGPVPNACSP 54
P+RR + G + + PPA RA + + EP P E STGM IA + + C
Sbjct: 505 PARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEISTGMQIAPKLLSLCWE 564
Query: 53 GDP 45
G P
Sbjct: 565 GYP 567
>AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p
protein.
Length = 1145
Score = 33.9 bits (74), Expect = 0.087
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 230 PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE-STGMHIAGPVPNACSP 54
P+RR + G + + PPA RA + + EP P E STGM IA + + C
Sbjct: 505 PARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEISTGMQIAPKLLSLCWE 564
Query: 53 GDP 45
G P
Sbjct: 565 GYP 567
>AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA
protein.
Length = 1145
Score = 33.9 bits (74), Expect = 0.087
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 230 PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE-STGMHIAGPVPNACSP 54
P+RR + G + + PPA RA + + EP P E STGM IA + + C
Sbjct: 505 PARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEISTGMQIAPKLLSLCWE 564
Query: 53 GDP 45
G P
Sbjct: 565 GYP 567
>U62547-1|AAC47658.1| 1145|Drosophila melanogaster mitochondrial DNA
polymerase catalyticsubunit precursor protein.
Length = 1145
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 230 PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE-STGMHIAGPVPNACSP 54
P+RR + G + + PPA R + + EP P E STGM IA + + C
Sbjct: 505 PARRPLLPGYPLWYRKLCRKPPAKREDEILEDDEEPWSPGASEISTGMQIAPKLLSLCWE 564
Query: 53 GDP 45
G P
Sbjct: 565 GYP 567
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 29 AAL*TMDPPGCRHSAQGRRYA 91
AAL +DPPGCR+SA+ R+ A
Sbjct: 8 AALELVDPPGCRNSARDRQRA 28
>AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH06048
protein.
Length = 377
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 143 SREPLEP--GPPIQRESTGMHIAGPVPNACSPGDP*FRAPPPGG 18
+R P P PPI+ G+ GP P SPG+P P PGG
Sbjct: 144 NRPPWLPINSPPIR--PGGLFPGGPSPGGPSPGEPSPGEPSPGG 185
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 185 WV-VQSPPADRAVRLSREPLEPGPPIQRESTGMHI-AGPVPNACSPGDP*FRAPPPGG 18
W+ + SPP P GP S G GP P SPG P P PGG
Sbjct: 148 WLPINSPPIRPGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGG 205
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 125 PGPPIQREST--GMHIAGPVPNACSPGDP*FRAPPPGG 18
PG P E + G GP P SPG P P PGG
Sbjct: 173 PGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGGPSPGG 210
>AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA
protein.
Length = 377
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 143 SREPLEP--GPPIQRESTGMHIAGPVPNACSPGDP*FRAPPPGG 18
+R P P PPI+ G+ GP P SPG+P P PGG
Sbjct: 144 NRPPWLPINSPPIR--PGGLFPGGPSPGGPSPGEPSPGEPSPGG 185
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 185 WV-VQSPPADRAVRLSREPLEPGPPIQRESTGMHI-AGPVPNACSPGDP*FRAPPPGG 18
W+ + SPP P GP S G GP P SPG P P PGG
Sbjct: 148 WLPINSPPIRPGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGG 205
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 125 PGPPIQREST--GMHIAGPVPNACSPGDP*FRAPPPGG 18
PG P E + G GP P SPG P P PGG
Sbjct: 173 PGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGGPSPGG 210
>AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p
protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 137 EPLEPGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPPGG 18
+P P P + T GP P P DP R PPGG
Sbjct: 27 QPGYPQPGQPQHITPAETYGPQPPPMPPRDPHTRVDPPGG 66
>AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB,
isoform B protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 137 EPLEPGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPPGG 18
+P P P + T GP P P DP R PPGG
Sbjct: 27 QPGYPQPGQPQHITPAETYGPQPPPMPPRDPHTRVDPPGG 66
>AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA,
isoform A protein.
Length = 916
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 137 EPLEPGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPPGG 18
+P P P + T GP P P DP R PPGG
Sbjct: 425 QPGYPQPGQPQHITPAETYGPQPPPMPPRDPHTRVDPPGG 464
>BT021393-1|AAX33541.1| 1322|Drosophila melanogaster LD15043p
protein.
Length = 1322
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 872 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 904
>AY051507-1|AAK92931.1| 826|Drosophila melanogaster GH15731p
protein.
Length = 826
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 424 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 456
>AL031227-2|CAA20226.1| 958|Drosophila melanogaster EG:66A1.3
protein.
Length = 958
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 577 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 609
>AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2
protein.
Length = 1306
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 873 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 905
>AE014298-649|AAF45963.3| 1305|Drosophila melanogaster CG12179-PA,
isoform A protein.
Length = 1305
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 872 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 904
>AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB,
isoform B protein.
Length = 1019
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 586 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 618
>AE014298-647|AAF45961.3| 981|Drosophila melanogaster CG12184-PA
protein.
Length = 981
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 125 PGPPIQRESTGMHIAGPVPNACSPGDP*FRAPPP 24
P PP++ ES G+++ P+ P P + PPP
Sbjct: 579 PPPPVRIESVGVNVTNSDPSTL-PAPPPTQPPPP 611
>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
protein.
Length = 1542
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = -2
Query: 206 GIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQR-----ESTGMHIAGPVPNACSPGDP* 42
G++Y Q V + R +EPL P P Q+ +++ H G V + +PG
Sbjct: 643 GVQYGQ---VINEDIGNIKRPLKEPLPPPPNFQQMPSIQQNSNFHQNGNVATSGAPGTIS 699
Query: 41 FRAPPP 24
++ PPP
Sbjct: 700 YQEPPP 705
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,697,344
Number of Sequences: 53049
Number of extensions: 364340
Number of successful extensions: 1154
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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