BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M20
(157 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 37 0.003
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 37 0.004
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 37 0.004
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 37 0.004
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 37 0.004
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 37 0.004
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 37 0.004
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 64 NATMSGGLDLLALSEEDVTKMLCGDHPFGS 153
+ MSGGLD+L+L E+D+TKML GS
Sbjct: 41 HVNMSGGLDILSLKEDDITKMLVATTHLGS 70
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 73 MSGGLDLLALSEEDVTKMLCGDHPFGS 153
MSGGLD+L+L E+D+TKML GS
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGS 27
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,324,196
Number of Sequences: 53049
Number of extensions: 100488
Number of successful extensions: 255
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 24,988,368
effective HSP length: 32
effective length of database: 23,290,800
effective search space used: 442525200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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