Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M17
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 51 2e-07
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 51 2e-07
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 51 2e-07
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 35 0.008
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 35 0.008
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 33 0.025
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 33 0.025
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 29 0.54
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 29 0.54
L23645-1|AAK26138.1| 582|Caenorhabditis elegans Hypothetical pr... 29 0.71
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 29 0.71
AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal pro... 28 1.2
AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channe... 27 1.6
AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying de... 27 1.6
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 27 2.2
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 27 2.2
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 27 2.2
AF039711-4|ABD94101.1| 238|Caenorhabditis elegans Hypothetical ... 27 2.2
AF039711-3|AAB96709.1| 314|Caenorhabditis elegans Hypothetical ... 27 2.2
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 27 2.9
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 2.9
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 2.9
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 2.9
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 26 5.0
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 26 5.0
Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical pr... 25 6.6
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +2
Query: 164 KTERSRVDLRGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
+ + ++ + G++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 21 REQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Score = 34.3 bits (75), Expect = 0.014
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 103 MAMFPGAVAFDEYGRPFIIIKDREKQSRLT 192
MA + FDE G+PFI+++++E Q R+T
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRIT 30
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +2
Query: 164 KTERSRVDLRGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
+ + ++ + G++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 21 REQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Score = 34.3 bits (75), Expect = 0.014
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 103 MAMFPGAVAFDEYGRPFIIIKDREKQSRLT 192
MA + FDE G+PFI+++++E Q R+T
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRIT 30
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +2
Query: 164 KTERSRVDLRGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
+ + ++ + G++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 21 REQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Score = 34.3 bits (75), Expect = 0.014
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 103 MAMFPGAVAFDEYGRPFIIIKDREKQSRLT 192
MA + FDE G+PFI+++++E Q R+T
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRIT 30
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 35.1 bits (77), Expect = 0.008
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 212 SHIQAARQIAGILRTSLGPRGLDK 283
S+I AA+ +A +RTSLGPRG+DK
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDK 58
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 35.1 bits (77), Expect = 0.008
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 212 SHIQAARQIAGILRTSLGPRGLDK 283
S+I AA+ +A +RTSLGPRG+DK
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDK 58
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 33.5 bits (73), Expect = 0.025
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 191 RGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
+G + S+I A + +A +RT+LGPRGLDK
Sbjct: 17 QGKGQIISNINACQVVADSIRTTLGPRGLDK 47
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 33.5 bits (73), Expect = 0.025
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 191 RGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
+G + S+I A + +A +RT+LGPRGLDK
Sbjct: 17 QGKGQIISNINACQVVADSIRTTLGPRGLDK 47
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 29.1 bits (62), Expect = 0.54
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 215 HIQAARQIAGILRTSLGPRGLDK 283
++ AA IA I+++SLGP GLDK
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDK 47
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 29.1 bits (62), Expect = 0.54
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 215 HIQAARQIAGILRTSLGPRGLDK 283
++ AA IA I+++SLGP GLDK
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDK 47
>L23645-1|AAK26138.1| 582|Caenorhabditis elegans Hypothetical
protein F54F2.5a protein.
Length = 582
Score = 28.7 bits (61), Expect = 0.71
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 119 ERWPLTSMDVHL*L*KTERSRVDLRGIDALKSHIQAARQIAGILRT 256
ER SM +H + K R R+D G D L+ H+ + ++ G +RT
Sbjct: 160 ERNSQESMVIHEKIQKAVR-RLDYPGEDELRDHLNGSTEVQGTIRT 204
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 215 HIQAARQIAGILRTSLGPRGLDK 283
+I A + IA ++RTSLGPR + K
Sbjct: 28 NINACKTIADVIRTSLGPRAMLK 50
>AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 17, isoform a protein.
Length = 187
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 101 KWPCSLERWPLTSMDVHL*L*KTERSRVDLRGID 202
+W + RWP+ S D L L K S + +G+D
Sbjct: 77 QWNTTQGRWPVKSADFLLDLLKNAESNAEYKGLD 110
>AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channel
EGL-2 protein.
Length = 956
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 37 IAKFSNFKSIFI*CFLSDYILKMAMFPGAVAFDEYGRPFIIIKDRE 174
I +S+FK+I+ L+ M P +AF RPF +I RE
Sbjct: 209 ILHYSSFKTIWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE 254
>AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying
defective protein 2 protein.
Length = 956
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 37 IAKFSNFKSIFI*CFLSDYILKMAMFPGAVAFDEYGRPFIIIKDRE 174
I +S+FK+I+ L+ M P +AF RPF +I RE
Sbjct: 209 ILHYSSFKTIWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE 254
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 191 RGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
RG A S A I +++++LGP+G+DK
Sbjct: 15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDK 45
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 191 RGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
RG A S A I +++++LGP+G+DK
Sbjct: 15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDK 45
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 191 RGIDALKSHIQAARQIAGILRTSLGPRGLDK 283
RG A S A I +++++LGP+G+DK
Sbjct: 15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDK 45
>AF039711-4|ABD94101.1| 238|Caenorhabditis elegans Hypothetical
protein F49D11.3b protein.
Length = 238
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 225 AWICDFRASIPRKSTLLLSVFYNYKWTSILVKGHRSREHGHFQNII 88
+W CDF +P+ L++ N + +SIL + ++ G Q ++
Sbjct: 123 SWNCDFDKDLPKWQLLMMGADSNERKSSILHLANILKKQGVKQELV 168
>AF039711-3|AAB96709.1| 314|Caenorhabditis elegans Hypothetical
protein F49D11.3a protein.
Length = 314
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 225 AWICDFRASIPRKSTLLLSVFYNYKWTSILVKGHRSREHGHFQNII 88
+W CDF +P+ L++ N + +SIL + ++ G Q ++
Sbjct: 199 SWNCDFDKDLPKWQLLMMGADSNERKSSILHLANILKKQGVKQELV 244
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 237 ICRAAWICDFRASIPRKSTLLLSVFYNYKWTSILV 133
+C AWI + SI +++ F+N+ WT + +
Sbjct: 155 VCICAWILE---SILSHQRMVIRAFFNWGWTRVFI 186
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 133 QRPPLQGTWPFSKYNHLEN 77
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 133 QRPPLQGTWPFSKYNHLEN 77
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 133 QRPPLQGTWPFSKYNHLEN 77
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +2
Query: 203 ALKSHIQAARQIAGILRTSLGPRGLDK 283
ALK+ +++ ++A +++ +LGPR +K
Sbjct: 116 ALKTVLESQHRLAAVIKETLGPREKEK 142
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +2
Query: 203 ALKSHIQAARQIAGILRTSLGPRGLDK 283
ALK+ +++ ++A +++ +LGPR +K
Sbjct: 116 ALKTVLESQHRLAAVIKETLGPREKEK 142
>Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical
protein K09A9.3 protein.
Length = 450
Score = 25.4 bits (53), Expect = 6.6
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -3
Query: 246 IPAICRAAWICDFRASIPRKSTLLLSVFYNYKWTSILVKGHRSREHGHFQNI---IT*KT 76
IP R +I F T L VF+ W I+V S G+F + T KT
Sbjct: 354 IPVYLRLLYIPFFIFCNYLPETRTLPVFFESTWLFIIVAASMSFGSGYFSGLSMMYTSKT 413
Query: 75 LDENRFKI 52
+D ++ ++
Sbjct: 414 VDPSKAQV 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,799,545
Number of Sequences: 27780
Number of extensions: 122644
Number of successful extensions: 332
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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