Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M16
(273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 165 5e-42
Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 4.2
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 26 4.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 4.2
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 25 5.5
U13072-2|AAK31397.2| 380|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z82057-3|CAB04860.2| 303|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 25 7.3
U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying defe... 25 7.3
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 25 7.3
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 25 9.7
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 25 9.7
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 9.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 165 bits (400), Expect = 5e-42
Identities = 72/91 (79%), Positives = 78/91 (85%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYFQLS 180
GRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E LS
Sbjct: 2 GRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLS 61
Query: 181 SEALEAGRICCNKYLVKNCGKDQFHIRMRLH 273
SEALEA RIC NKY+VKNCGKD FH+R+R H
Sbjct: 62 SEALEAARICANKYMVKNCGKDGFHLRVRKH 92
>Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical
protein F32A7.6 protein.
Length = 537
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 208 RYGLLPAPQNSAESTHQTLSARIV 137
R+G LP P+NS E H T A +V
Sbjct: 163 RFGDLPTPKNSKEFEHGTQCAGLV 186
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.6 bits (56), Expect = 2.4
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -3
Query: 205 YGLLPAPQNSAE--STHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 32
Y L P PQ S + +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 31 NIDN 20
+ N
Sbjct: 288 DHQN 291
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 76 PDPKIRIFDLGKKRATVDDFPLCVHLV 156
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 76 PDPKIRIFDLGKKRATVDDFPLCVHLV 156
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Frame = +2
Query: 185 RRWKQAVSVATSTS-----*RTAVKISSTS 259
RRWK+ V +AT+TS R+ V+ +STS
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTS 533
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 10 PARCYRYCKNKPYPKSRFCRGVPDPKIRIF 99
PA CYR P P++ +GVP R+F
Sbjct: 166 PAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
>U13072-2|AAK31397.2| 380|Caenorhabditis elegans Hypothetical
protein C07D10.5 protein.
Length = 380
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 217 CCNRYGLLPAPQNSAESTHQTLS 149
C YGLLP+ NS E +LS
Sbjct: 247 CFKHYGLLPSNSNSLEEKMASLS 269
>Z82057-3|CAB04860.2| 303|Caenorhabditis elegans Hypothetical
protein T26H8.2 protein.
Length = 303
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 211 NRYGLLPAPQNSAESTHQTLSARIVGSHP-LSLSFCPSRKY 92
N +G+L Q+ ++ H T+ A IV S L F S Y
Sbjct: 40 NSFGMLTTSQSIGDAVHSTIFAFIVSSMCFFDLKFLKSYSY 80
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 25.0 bits (52), Expect = 7.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 68 GVCLTQRSVFSTWAK 112
G+C +R +F TWA+
Sbjct: 162 GICNKERKIFETWAR 176
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 265 SSGCGTDLYRSSLRGTCCNR 206
SSGCG S G+CC R
Sbjct: 353 SSGCGCSSGYSQCGGSCCRR 372
>U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying
defective protein 26 protein.
Length = 317
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 79 DPKIRI-FDLGKKRATVDDFPLCVHLVSDEYFQLSSE 186
DP I F +GK+ +D+ P+ VH D+Y + E
Sbjct: 116 DPPIGSQFPVGKELIQLDEVPVGVHDRQDKYLEKGDE 152
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 55 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHL--VSDEYFQLSSEALEAGRI 207
S+ RG+ + R++++ K +DD+ L L V+ + L ++A E +I
Sbjct: 454 SKMVRGIVEDMDRVWEMKKSTCDIDDYCLYYFLKGVALRHLSLHAQAEECFKI 506
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 58 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYFQLSSEALEAGR 204
R C + K I D K+ A ++ + +++ EY Q++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 287 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 315
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -3
Query: 211 NRYGLLPAPQNSAESTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHP 68
+R+G + Q + + +S + S P+S++ PS ++ S+ P
Sbjct: 107 SRHGSVDYSQTLPPAIDRRMSQSYIPSAPVSIAGTPSSRHNSISAGSP 154
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 251 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 279
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 254 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 282
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 6875 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6903
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 6299 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6327
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 87
GRRPA Y Y + +P VP P+
Sbjct: 6939 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6967
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,430,098
Number of Sequences: 27780
Number of extensions: 118693
Number of successful extensions: 321
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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