Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M15
         (187 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   7.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   7.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         18   9.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    18   9.5  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              18   9.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    18   9.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    18   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 4/5 (80%), Positives = 5/5 (100%)
 Frame = -3

Query: 155 CDCGW 141
           C+CGW
Sbjct: 151 CNCGW 155


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +1

Query: 118 VKCPAPTCQPQSHFACAD 171
           + C   T   ++H AC D
Sbjct: 627 ISCRQGTVPDETHSACRD 644


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 20  PVARTSLHVATVNAFK 67
           PVA TSL+      F+
Sbjct: 269 PVASTSLYYVNTEQFR 284


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 150 VTFRLC*RPLHI 185
           +TF +C  P H+
Sbjct: 267 ITFFICWAPFHV 278


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 44  VATVNAFK 67
           +ATVNAFK
Sbjct: 101 LATVNAFK 108


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 20  PVARTSLHVATVNAFK 67
           PVA TSL+      F+
Sbjct: 269 PVASTSLYYVNTEQFR 284


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 20  PVARTSLHVATVNAFK 67
           PVA TSL+      F+
Sbjct: 269 PVASTSLYYVNTEQFR 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,353
Number of Sequences: 438
Number of extensions: 573
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)