Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M13
(378 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.24
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 28 0.56
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 0.56
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 26 1.7
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 26 1.7
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 2.3
SPAC1002.21 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 3.0
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 25 3.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 3.0
SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr ... 25 3.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 3.9
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 3.9
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 3.9
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 25 5.2
SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase |Schiz... 25 5.2
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 24 6.9
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 24 6.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 6.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 9.1
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 24 9.1
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 24 9.1
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 24 9.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 24 9.1
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 24 9.1
SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 24 9.1
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 24 9.1
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 24 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.24
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = -2
Query: 374 VPCPILVA-ILRDPQSA--SRHGPE-PRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
+P P+ V+ IL P S H P P P A R PP LSS A P P P
Sbjct: 969 IPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLP 1027
Score = 26.6 bits (56), Expect = 1.3
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = -2
Query: 374 VPCPILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
VP P VA P +S P P+ A +PP APP S P PPP
Sbjct: 1161 VPKPS-VAAPPVPAPSSGIPPVPKPAAG-VPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 25.8 bits (54), Expect = 2.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 374 VPCPILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
VP P + + P A+ P+P + +PP + APP S A P P P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKP---SVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 25.4 bits (53), Expect = 3.0
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 290 RLPPTAS-AQRAPPTRSLSSDANPCPPP 210
R+PP + +APP S+DA P P P
Sbjct: 1010 RVPPVPKLSSKAPPVPLPSADAPPIPVP 1037
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 27.9 bits (59), Expect = 0.56
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 130 SQKAESLVTTLPKLLLTRNNDFHCFYL 50
S+ + LV+T+P LL NDF C YL
Sbjct: 347 SKLIQDLVSTVPILLFYGENDFLCNYL 373
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 0.56
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 374 VPCPILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPP 213
+P P A + A P P+ PPTAS R PP + S NP P
Sbjct: 907 LPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQ-PSHPNPYTP 959
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.2 bits (55), Expect = 1.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 286 RRQALCRGSGPCLLALCGS 342
++++LC G+ CLLA C S
Sbjct: 916 KKESLCSGTFSCLLACCNS 934
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 26.2 bits (55), Expect = 1.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 298 MLGACRRQRAHSAPRPRARCRLTPTLVLLLDKYSARIFLSQ 176
+LGA + H P+PR +LT T+ + K + FL +
Sbjct: 1338 LLGASAQSWYHEMPKPRTSLKLTETVKGGIQKKTLDTFLME 1378
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 131 ESKSREFGNHSAQAPP 84
E+KSREFG S +PP
Sbjct: 69 EAKSREFGQRSEPSPP 84
>SPAC1002.21 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 148
Score = 25.4 bits (53), Expect = 3.0
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 346 CEIRRAQVDTVQSRGTMLGACRRQRAHSAPRPRARCRLTPTLVLLLDKYSARIFLSQFSH 167
C R A +D +SRG ++ AC R A + C ++ ++ + +S++SH
Sbjct: 54 CLHRCAFLDLTKSRGRVVHACSRAALPRAIADASHCLEEKKFFCNVNNWNWLMSVSKYSH 113
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 3.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 314 PEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPP 213
P+P + +PP SA P RSL+ N PP
Sbjct: 232 PDPPKTS--MPPFGSAGSPSPNRSLNVSNNTTPP 263
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 3.0
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 287 LPPTASAQRA---PPTRSLSSDANPCPPPRQIQCQDFSVSV*P 168
+PPT+++ + PPT + S+D N P P S S+ P
Sbjct: 251 VPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPP 293
Score = 24.6 bits (51), Expect = 5.2
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 287 LPPTASAQRA---PPTRSLSSDANPCPPPRQIQCQDFSVSV*P 168
+PPT+++ + PPT + S+D N P P S S+ P
Sbjct: 138 VPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPP 180
Score = 24.6 bits (51), Expect = 5.2
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = -2
Query: 287 LPPTASAQRA---PPTRSLSSDANPCPPP 210
+PPT+++ + PPT + S+D N P P
Sbjct: 195 VPPTSTSSTSIPIPPTSTSSTDTNSSPLP 223
>SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 384
Score = 25.0 bits (52), Expect = 3.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = +2
Query: 161 DAMAKLRQKNPGTVFVEEEDKG----WRQTTASA 250
D+ KL ++N G +EE+D G W Q ++A
Sbjct: 332 DSFLKLSKQNLGLEIIEEKDNGDLSMWNQRNSAA 365
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 3.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 93 SSSSPGITTFIASTSLVKSTNCEIYTPSSS 4
SSSSP ++F ++TS KS++ T SSS
Sbjct: 346 SSSSPSSSSFSSTTSSSKSSSSFSSTVSSS 375
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 3.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 376 LFHARSWWPSCEIRRAQVDTVQSRGTMLGACRRQRA 269
LF + +P C R D + ML AC R R+
Sbjct: 896 LFDEPAKYPDCSGSRTLRDNISDVKAMLSACHRGRS 931
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 3.9
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 314 PEPRHNAWR--LPPTASAQRA---PPTRSLSSDANPCPPPRQI 201
P HN+ +PPT S PPT SL++ PP +
Sbjct: 73 PSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHV 115
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 24.6 bits (51), Expect = 5.2
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 149 FITPDAMAKLRQKNPGTVFVEE 214
++TP+A +L+++NP + EE
Sbjct: 1698 YLTPEAYERLQKENPNILTTEE 1719
>SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 24.6 bits (51), Expect = 5.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 155 TPDAMAKLRQKNPGTVFVE 211
TP+ + KLR NPG V+ E
Sbjct: 410 TPNIINKLRVTNPGYVYAE 428
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 24.2 bits (50), Expect = 6.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 244 RCRLTPTLVLLLDKYSARI 188
R LTPT VLLLD+ +A +
Sbjct: 1373 RALLTPTRVLLLDEATAAV 1391
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 24.2 bits (50), Expect = 6.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 2 HEDDGVYISQLVDFTNEVEAM 64
H DDG + +DF NE E++
Sbjct: 221 HNDDGFWDDFDIDFNNETESI 241
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 24.2 bits (50), Expect = 6.9
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 332 SASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDAN----PCPPPRQIQCQDFSVSV 174
SAS+ P +A P S AP ++S + P PPP +++ +D +++
Sbjct: 1058 SASKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPPAEVEKKDLYLAL 1114
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.8 bits (49), Expect = 9.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 26 SQLVDFTNEVEAMKVVIPGEEELGQSG 106
+QLV+FTNE+ A+K V E+G +G
Sbjct: 3602 AQLVEFTNELLALKNVY---SEVGVNG 3625
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 23.8 bits (49), Expect = 9.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 287 LPPTASAQRAPPTRSLSSDANPCPPPRQIQCQDFS 183
LP S PP S SS +P PP Q FS
Sbjct: 276 LPSHLSQSNVPPQLSHSSVPSPAPPRSVSQPTYFS 310
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 23.8 bits (49), Expect = 9.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 136 GMSQKAESLVTTLPKLLLTRNNDFHCFYLISK 41
G++Q E K+LLTR+ D YL+++
Sbjct: 50 GLNQLEEKARNLESKVLLTRDGDTKAHYLLAE 81
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 23.8 bits (49), Expect = 9.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 306 RLWTVSTCALRISQDGHQDRAW 371
++W++S+ + D H+DR W
Sbjct: 574 KVWSLSSGECVATLDNHEDRVW 595
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 23.8 bits (49), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 222 LSSSSTNTVPGFFCLSLAIASGVMKSAWAA*VKKQRVW 109
+ +S + P F C+ L GV S+ A K VW
Sbjct: 592 MKTSLASLSPDFDCIGLQFVVGVSASSHLASQWKDEVW 629
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 23.8 bits (49), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 139 GGMSQKAESLVTTLPK--LLLTRNND 68
GGM Q L++T+P+ LLL + ND
Sbjct: 489 GGMLQSIIRLLSTMPRLTLLLMKTND 514
>SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase
Exg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 23.8 bits (49), Expect = 9.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 130 SQKAESLVTTLPKLLLTRNNDFHCFYLISK 41
S K L LP+L + DF+C L SK
Sbjct: 530 SYKKSWLAGLLPRLAYSTTKDFNCSMLDSK 559
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 23.8 bits (49), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 179 RQKNPGTVFVEEEDKGWRQTTASAWAGRAVRS 274
R P +E EDKG+R ++S A R RS
Sbjct: 710 RSYTPEGRLIESEDKGYRSRSSSP-ASRKYRS 740
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 23.8 bits (49), Expect = 9.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 161 DAMAKLRQKNPGTVFVEEED 220
DA A ++K+P +F++E D
Sbjct: 269 DAFALAKEKSPAIIFIDELD 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,670,235
Number of Sequences: 5004
Number of extensions: 32890
Number of successful extensions: 166
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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