Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M13
(378 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 0.52
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 0.52
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 0.52
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 1.2
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 2.1
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 2.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 2.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 2.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 3.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 8.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 8.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 8.4
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 0.52
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 192 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEI 22
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAAL 274
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 0.52
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 192 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEI 22
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAAL 274
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.2 bits (50), Expect = 0.52
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 192 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEI 22
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 160 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAAL 213
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.0 bits (47), Expect = 1.2
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ ++ R P R EP P Q PP L +A P P
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 209
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 186 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 237
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 214 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKP 265
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 47 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 98
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 75 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 126
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 18 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 69
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 46 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 97
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 74 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEP 125
Score = 22.2 bits (45), Expect = 2.1
Identities = 14/52 (26%), Positives = 17/52 (32%)
Frame = -2
Query: 365 PILVAILRDPQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSDANPCPPP 210
P+ + R P R EP P Q PP L +A P P
Sbjct: 102 PVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEP 153
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 2.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 185 KNPGTVFVEEEDKGWRQTTASAWAGRAVRSLSAAGAKHCAAALDRVY 325
KNP V EED G T +A V +L A A H +A+ + V+
Sbjct: 578 KNPNLVAHREEDLGSESKTINA----VVNAL-AEQAAHASASEESVH 619
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 2.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 185 KNPGTVFVEEEDKGWRQTTASAWAGRAVRSLSAAGAKHCAAALDRVY 325
KNP V EED G T +A V +L A A H +A+ + V+
Sbjct: 546 KNPNLVAHREEDLGSESKTINA----VVNAL-AEQAAHASASEESVH 587
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 3.6
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 340 IRRAQVDTVQSRGTMLGACRR---QRAHSAPRPRARCRLTPTL 221
++RA + GT+ G C+R + + S P P + +T L
Sbjct: 539 VQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEAL 581
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 8.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 199 CICRGGGQGLASDD 240
C+ RG G G DD
Sbjct: 1606 CVLRGKGHGSDKDD 1619
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = -2
Query: 338 PQSASRHGPEPRHNAWRLPPTASAQRAPPTRSLSSD 231
P+S+S + + + +PP T SLS D
Sbjct: 400 PESSSNLQEKTKIDLLEIPPIRKISDCSTTSSLSGD 435
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 335 QSASRHGPEPRHNAWRLPPTASAQRAPPTRSLS 237
+S R P + WR + R PP LS
Sbjct: 134 KSVQRIKPYDEYYVWRDARIVNGTRQPPNNWLS 166
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,643
Number of Sequences: 438
Number of extensions: 2316
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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