Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M12
         (217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   2.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   3.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   3.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              19   5.1  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              19   5.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    19   5.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   5.1  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    19   5.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   5.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   8.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   8.8  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 116 DTPSQRQIMQHSFP 75
           DTP++++I++  FP
Sbjct: 53  DTPNRQKILKDGFP 66


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 127 FECMILLPRDK*CNTPFLIFI 65
           F   +LLPR K    PF +F+
Sbjct: 600 FPGRLLLPRGKKEGMPFQLFL 620


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 127 FECMILLPRDK*CNTPFLIFI 65
           F   +LLPR K    PF +F+
Sbjct: 600 FPGRLLLPRGKKEGMPFQLFL 620


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1

Query: 82  ECCIICLWEGVSYIRTK 132
           +C + CLWE    +  K
Sbjct: 70  KCYMYCLWEQFGLVDDK 86


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 206 RNSRSNETYYTRH 168
           RN+   E YY +H
Sbjct: 44  RNNGEEEAYYRKH 56


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -2

Query: 105 PETNNATLLS*YLLFT--VITLK-QLTYSSLQLTFAS 4
           P +    LL  YLLFT  ++TL   +T + L + F S
Sbjct: 291 PTSLTVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRS 327


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 167 SDECSTFHSNDCSAI 211
           SDEC+    +DC  +
Sbjct: 560 SDECNKKQPSDCDTL 574


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 140 CNQKLCTSLSDECSTFHSN 196
           C+QK    LSD  S + SN
Sbjct: 26  CSQKAGFDLSDLKSMYESN 44


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 170 DECSTFHSN 196
           D+CST+ SN
Sbjct: 151 DKCSTYQSN 159


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 38  NCFKVITVNNKY 73
           N +KV TV +KY
Sbjct: 458 NVYKVETVGDKY 469


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 38  NCFKVITVNNKY 73
           N +KV TV +KY
Sbjct: 458 NVYKVETVGDKY 469


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,110
Number of Sequences: 438
Number of extensions: 839
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)