Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M11
(179 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 0.34
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 1.4
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 3.1
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 19 4.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 19 5.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 19 5.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 19 7.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 18 9.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 18 9.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 18 9.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 18 9.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 18 9.6
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 18 9.6
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 18 9.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 18 9.6
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.0 bits (47), Expect = 0.34
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 42 FFGLVSFTAVGAFSD 86
FFGLVS TA+G +++
Sbjct: 315 FFGLVSDTALGCWNE 329
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 42 FFGLVSFTAVGAFSD 86
FFGLV+ +A+G +++
Sbjct: 319 FFGLVNNSAIGCWNE 333
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 19.8 bits (39), Expect = 3.1
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +3
Query: 42 FFGLVSFTAVGAFSD 86
FFGL++ +A+G +++
Sbjct: 319 FFGLMNNSAIGCWNE 333
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 42 FFGLVSFTAVGAFS 83
FFGL+S A+G ++
Sbjct: 321 FFGLLSDLAIGCWN 334
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 77 GTYSCEG 57
G YSCEG
Sbjct: 123 GVYSCEG 129
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 77 GTYSCEG 57
G YSCEG
Sbjct: 123 GVYSCEG 129
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 42 FFGLVSFTAVGAFSDII 92
FF L+ AVG ++ ++
Sbjct: 329 FFNLIDQNAVGCWNSLL 345
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 86 HHQDFLPHPSVAWL 127
++ +FLP P W+
Sbjct: 122 YYGNFLPRPMGPWI 135
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 86 HHQDFLPHPSVAWL 127
++ +FLP P W+
Sbjct: 125 YYGNFLPRPMGPWI 138
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 86 HHQDFLPHPSVAWL 127
++ +FLP P W+
Sbjct: 125 YYGNFLPRPMGPWI 138
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 86 HHQDFLPHPSVAWL 127
++ +FLP P W+
Sbjct: 125 YYGNFLPRPMGPWI 138
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 86 HHQDFLPHPSVAWL 127
++ +FLP P W+
Sbjct: 125 YYGNFLPRPMGPWI 138
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -3
Query: 144 QTCGHPSQATEGC 106
+TC +TEGC
Sbjct: 113 ETCKKEVTSTEGC 125
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -3
Query: 144 QTCGHPSQATEGC 106
+TC +TEGC
Sbjct: 87 ETCKKEVTSTEGC 99
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 42 FFGLVSFTAVGAFSD 86
F GLV +AVG +++
Sbjct: 316 FVGLVGNSAVGCWNE 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,772
Number of Sequences: 438
Number of extensions: 684
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -