Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M10
         (152 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036234-1|AAH36234.1|  902|Homo sapiens ATP/GTP binding protein...    27   8.4  
BC028200-1|AAH28200.1|  285|Homo sapiens AGBL2 protein protein.        27   8.4  
AK223176-1|BAD96896.1|  555|Homo sapiens hypothetical protein FL...    27   8.4  
AK223171-1|BAD96891.1|  555|Homo sapiens hypothetical protein FL...    27   8.4  
AK027251-1|BAB15707.1|  325|Homo sapiens protein ( Homo sapiens ...    27   8.4  

>BC036234-1|AAH36234.1|  902|Homo sapiens ATP/GTP binding
           protein-like 2 protein.
          Length = 902

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 EKKKTKIVETRVKPDEQYDRNDIIQFL 44
           +KKK K ++TR + +EQY + +++Q L
Sbjct: 747 KKKKKKSLQTRKQRNEQYQKKNLMQKL 773


>BC028200-1|AAH28200.1|  285|Homo sapiens AGBL2 protein protein.
          Length = 285

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 EKKKTKIVETRVKPDEQYDRNDIIQFL 44
           +KKK K ++TR + +EQY + +++Q L
Sbjct: 130 KKKKKKSLQTRKQRNEQYQKKNLMQKL 156


>AK223176-1|BAD96896.1|  555|Homo sapiens hypothetical protein
           FLJ23598 variant protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 EKKKTKIVETRVKPDEQYDRNDIIQFL 44
           +KKK K ++TR + +EQY + +++Q L
Sbjct: 400 KKKKKKSLQTRKQRNEQYQKKNLMQKL 426


>AK223171-1|BAD96891.1|  555|Homo sapiens hypothetical protein
           FLJ23598 variant protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 EKKKTKIVETRVKPDEQYDRNDIIQFL 44
           +KKK K ++TR + +EQY + +++Q L
Sbjct: 400 KKKKKKSLQTRKQRNEQYQKKNLMQKL 426


>AK027251-1|BAB15707.1|  325|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23598 fis, clone LNG15381. ).
          Length = 325

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 EKKKTKIVETRVKPDEQYDRNDIIQFL 44
           +KKK K ++TR + +EQY + +++Q L
Sbjct: 276 KKKKKKSLQTRKQRNEQYQKKNLMQKL 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,431,120
Number of Sequences: 237096
Number of extensions: 121358
Number of successful extensions: 321
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 76,859,062
effective HSP length: 30
effective length of database: 69,746,182
effective search space used: 1394923640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)