Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M09
         (163 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   0.51 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    19   4.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   4.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      18   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      18   8.3  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 0.51
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 104 LTYESNLQYNLIKYFDTI 157
           LTY S+++Y +++  DTI
Sbjct: 14  LTYVSSVEYLILREIDTI 31


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
          protein protein.
          Length = 205

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +3

Query: 60 NYVRIYDRQKY 92
          +Y++IY ++KY
Sbjct: 24 SYLKIYHKEKY 34


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory
          receptor candidate 58 protein.
          Length = 376

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 51 CMINYVRIYDRQ 86
          C I YVRIY ++
Sbjct: 58 CWIIYVRIYCKE 69


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 43  RLATRAEKSCSH 8
           RLA R+ + C H
Sbjct: 607 RLAARSRRCCYH 618


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 43  RLATRAEKSCSH 8
           RLA R+ + C H
Sbjct: 499 RLAARSRRCCYH 510


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,129
Number of Sequences: 336
Number of extensions: 621
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 33
effective length of database: 111,497
effective search space used:  2229940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)