Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M09
         (163 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    21   6.7  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    21   6.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    20   8.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 3   PPWLQDF 23
           PPWL DF
Sbjct: 510 PPWLDDF 516


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 104 NINLIFLPIIDTYIVYHTLVS 42
           ++ L+FLP++     Y  +VS
Sbjct: 279 DVGLLFLPLLTMGFAYSMIVS 299


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -2

Query: 93  NIFAYHRYVHSLSYTGVG*PLVPKNPAA 10
           N   YHR     +    G PL+P N  A
Sbjct: 910 NNLHYHRSASPKATVAGGLPLLPSNALA 937


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,262
Number of Sequences: 2352
Number of extensions: 2780
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 33
effective length of database: 486,363
effective search space used:  9727260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)