Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M08
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   0.98 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   5.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   6.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   6.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   9.1  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          21   9.1  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    21   9.1  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    21   9.1  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 82  MVFFCFFAATIMIAVFYSDPH 20
           ++ F FF     IAV +S PH
Sbjct: 509 LIIFTFFTIVATIAVLFSAPH 529


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 63  KKQKKTIESINSRLALVMK--SGKYCLGY 143
           +  K T+ES+ S+LAL +   +  Y LG+
Sbjct: 152 RDDKATLESMGSQLALALANLTANYQLGF 180


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 268 WWTPVLAR 245
           WW+P+LAR
Sbjct: 345 WWSPLLAR 352


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 103 WLWL*SLANTAWATNKL 153
           WLWL  L +  W T  L
Sbjct: 119 WLWLLWLLSQTWITRHL 135


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 65   ETEKDH-RVY*FPSGSGYEVWQILLGLQTNFEDTQTRES*VGDHRQEFS 208
            E E D+ R   +P G+G E ++++     N +    RES + +   EFS
Sbjct: 2062 EYENDNLRSIKYPFGAGGEPFRLIYDWNGNGDVISIRESTMTEPMFEFS 2110


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 252 WLGEHNILSPTSSEEENSW 196
           W GE+  +   SS EE SW
Sbjct: 78  WRGENVAVKIFSSREECSW 96


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 221 LPQRRKIPGDDHQLSFPLSECLQSLFVAQAVF 126
           + Q  K PG D + S  LSE    +F+  A +
Sbjct: 270 IDQLLKAPGFDGKSSLTLSEIAAQVFLFVAAY 301


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 228 IEYYALLAKTGVHHYSGNNIELGTACGKYY 317
           +EY       G+ HY  + + LG   G ++
Sbjct: 361 VEYIPSTRMNGLCHYYDDELNLGCTFGAWH 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,450
Number of Sequences: 2352
Number of extensions: 7202
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)