Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M08
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical ... 153 4e-38
L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 30 0.34
AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical ... 28 1.4
Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical p... 27 3.2
Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical pr... 26 5.5
AF045638-2|AAC02560.1| 110|Caenorhabditis elegans Hypothetical ... 26 5.5
Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z37139-5|CAA85490.1| 558|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical
protein Y106G6H.3 protein.
Length = 113
Score = 153 bits (370), Expect = 4e-38
Identities = 70/93 (75%), Positives = 81/93 (87%)
Frame = +3
Query: 51 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNFPPLRKSEI 230
M A K +K E+INSRL++VMK+G+Y LGYKQTLK+L GKAKLVIIA N PPLRKSEI
Sbjct: 1 MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60
Query: 231 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCT 329
EYYA+LAKTGVHHY+GNNIELGTACG+ +RVCT
Sbjct: 61 EYYAMLAKTGVHHYNGNNIELGTACGRLFRVCT 93
>L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical
protein ZK686.1 protein.
Length = 44
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 108 LVMKSGKYCLGYKQTLKTLRQGKAKLVI 191
+VMK+G+Y L Y+Q LK+L AKLVI
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVI 27
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 30.3 bits (65), Expect = 0.34
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 200 EFSSSEEVGDRILCSPSQNRCPPLQ 274
+ SS+E+VG +LC P Q PPL+
Sbjct: 342 KISSTEDVGITVLCVPHQELIPPLE 366
>AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical
protein Y106G6A.2a protein.
Length = 428
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 199 LAMITNLAFP-CLSVFKVCL*PKQYLPDFITRARRELIDSMVFFCFFAATIMIAVFYSDP 23
L++I N P LS +C+ +++ + + R L D++++ C F + Y+DP
Sbjct: 312 LSVIFNFRPPETLSHHDLCI-RERWTKESLNRDWSTLCDAVIYLCIFIGMSHTKLKYTDP 370
Query: 22 HRH 14
H +
Sbjct: 371 HHN 373
>Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical
protein C01G10.15 protein.
Length = 100
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 38 NCYHNGCSKETEKDHRVY*FPSGS-GYEVWQILLG 139
N Y+NGCS + + Y +PS S GY + + G
Sbjct: 64 NGYNNGCSGCSNNNGYTYYYPSNSNGYTTYYLTYG 98
>Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical
protein F56C4.2 protein.
Length = 183
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 309 FRKQYRAQYCFHCSGGHLFWLGEHNILSPT 220
FR YR YCF+ S + + H + +PT
Sbjct: 79 FRFYYRRSYCFYNSRCYSLTMSCHPVATPT 108
>AF045638-2|AAC02560.1| 110|Caenorhabditis elegans Hypothetical
protein C35B1.4 protein.
Length = 110
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 267 GGHLFWLGEHNILSPTSSEEENSWR*SPT 181
GGH+ G++N +P +SEEE W PT
Sbjct: 37 GGHIDVTGQYNPETPRTSEEE--WSGFPT 63
>Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical
protein DH11.2 protein.
Length = 411
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 75 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVI 191
KT++ IN + L C G+++ L+ L++ KL +
Sbjct: 182 KTLQEINLDIVLSDNEDVTCAGFRELLRFLKEISYKLTV 220
>Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical
protein E04D5.2 protein.
Length = 404
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 100 RELIDSMVFFCFFAATIMIAVFYSDPHRHKPL 5
R I +++F CFF+ I I V Y+ + PL
Sbjct: 164 RGRIVTVIFVCFFSVAIRIPVLYAMKVKTFPL 195
>Z37139-5|CAA85490.1| 558|Caenorhabditis elegans Hypothetical
protein C14B1.9 protein.
Length = 558
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -2
Query: 197 GDDHQLS--FPLSECLQSLFVAQAVFARLHNQSQTGINRLDGLFLFLCCNHYDSSF 36
G+D+ L F E LQ ++ N ++TGI++L GL L CN F
Sbjct: 194 GEDNLLDTIFSQFEALQEQPGILGYVKKVENNNKTGISKLFGLMLPDGCNDKKMQF 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,334,834
Number of Sequences: 27780
Number of extensions: 165838
Number of successful extensions: 444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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