Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M07
(340 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 37 7e-04
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 31 0.048
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 26 1.4
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 1.8
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 25 3.2
SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr ... 25 3.2
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 25 4.2
SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces po... 24 5.5
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 24 7.3
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 24 7.3
SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces ... 24 7.3
SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 9.6
SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 23 9.6
SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 9.6
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 23 9.6
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 37.1 bits (82), Expect = 7e-04
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +2
Query: 146 KFPAGKVPAFESADGKVLLTESNAIAYYVANDD----LRGGDLATEARGLQWASWADSEL 313
KFP K+P F DG L+E+ AIA+Y+A+ + L G +A+ LQ+ S+ +SEL
Sbjct: 46 KFPLQKMPVFVGKDG-FPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQYCSFTNSEL 104
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 31.1 bits (67), Expect = 0.048
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 29 PENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADGKVLLTE 208
P F++ KA + QY+ A +FG +K +NF K+ ++ F S + +L+
Sbjct: 553 PNYFKSLKAELNRQYAAAVNSGTRPLLFGSLSKYQNFTKEKLESEIVRF-SFEHSILINT 611
Query: 209 SN 214
SN
Sbjct: 612 SN 613
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 26.2 bits (55), Expect = 1.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 176 RMLVLYPPGTSSRSFQSCWSHRIQNR 99
++L ++PP TSSR + W+ ++ N+
Sbjct: 118 KILDVHPPQTSSRKAATTWACKVHNQ 143
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 219 IALLSVSKTLPSALSNAGTLPAGNF 145
+ L+S S+TLP S + + P NF
Sbjct: 2 VGLISTSETLPKQESKSSSAPVSNF 26
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 25.0 bits (52), Expect = 3.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -2
Query: 219 IALLSVSKTLPSALSNAGTLPAGNFFK----KFSVLLVSPNTKSGATFTFAPEYCAAIN 55
+A ++ LP + SN L FF+ K+S+ SP S ++F P+ A+N
Sbjct: 106 LANKTIVSPLPESPSN-DALTESYFFRQPASKYSITQDSPRVSSTIAYSFKPKASIALN 163
>SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 364
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 118 LTEYKIGGYFHVRPGILCGDQRLVSAEIF 32
L EYK+ +++RPGI+ + L E+F
Sbjct: 76 LNEYKVA--YYLRPGIIPLNHNLAKQEVF 102
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 275 RGLQWASWADSELLPASCAWV 337
RG+QWASW L CA +
Sbjct: 29 RGVQWASWNLGIFLCLRCATI 49
>SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 220
Score = 24.2 bits (50), Expect = 5.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 146 KFPAGKVPAFESADGKVLLTESNAIAYY 229
KFP K+P F ADG L+E AI Y
Sbjct: 46 KFPLQKLPVFIGADG-FELSEVIAIVKY 72
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 26 YPENFRAYKALIAAQYSGANV 88
YP+ F + + AA+Y AN+
Sbjct: 34 YPQRFSTSQGMYAAEYGNANM 54
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 181 TFECWYFTRRELLQEVFSLVGLTE 110
T+ W + R LL +VF + L E
Sbjct: 62 TYSVWNYRREILLNDVFPKISLNE 85
>SPAC694.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 23.8 bits (49), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 89 KVAPDFVFGETNKTENFLKKFPAGKVPAFESA 184
KV FV G + +N + +PAG P+F++A
Sbjct: 118 KVYQSFVEG-LDANDNGISAYPAGLKPSFKAA 148
>SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 239 HLPRSKR*HCSPSAKLYRR 183
HLP+ K CS LYRR
Sbjct: 38 HLPQPKDRQCSTLVPLYRR 56
>SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 139
Score = 23.4 bits (48), Expect = 9.6
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +2
Query: 125 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDLRGGDLATEARGL 283
++ NF + PA + + + + + L+ +A +AN LR G +E+ G+
Sbjct: 8 RSRNFRRSDPAYDLDSSTAIENETKLSVKEKVAKEIANIALRSG--GSESNGI 58
>SPAC4H3.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 186 SALSNAGTLPAGNFFKKFSVLLVS 115
S LS+A + NF+ +++LLVS
Sbjct: 73 SLLSSAHKMNCCNFYSNYNILLVS 96
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 23.4 bits (48), Expect = 9.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 192 LPSALSNAGTLPAGNFFKKFSVLLVSPN 109
LPS LS G+LP S++L S N
Sbjct: 116 LPSILSTYGSLPIRRLLHHLSLMLPSFN 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,455,333
Number of Sequences: 5004
Number of extensions: 28023
Number of successful extensions: 78
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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