Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M07
(340 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 157 3e-39
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 157 3e-39
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 157 3e-39
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 157 3e-39
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 154 2e-38
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 54 5e-08
AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p pro... 36 0.013
AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA... 36 0.013
AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p pro... 31 0.38
AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA... 31 0.38
AE014296-883|AAN11611.1| 184|Drosophila melanogaster CG32247-PA... 30 0.88
U35148-1|AAA79093.1| 315|Drosophila melanogaster transcription ... 28 2.7
U02879-1|AAA68626.1| 315|Drosophila melanogaster transcription ... 28 2.7
M91081-1|AAA28929.1| 315|Drosophila melanogaster RNA polymerase... 28 2.7
M88164-1|AAA28930.1| 315|Drosophila melanogaster transcription ... 28 2.7
BT015269-1|AAT94498.1| 315|Drosophila melanogaster LD24035p pro... 28 2.7
BT011459-1|AAR99117.1| 315|Drosophila melanogaster RE29729p pro... 28 2.7
AE014134-1887|AAF52951.1| 315|Drosophila melanogaster CG5193-PA... 28 2.7
BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p pro... 28 3.6
AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p pro... 28 3.6
AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB... 28 3.6
AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA... 28 3.6
AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD2387... 27 4.7
AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA... 27 4.7
AY069434-1|AAL39579.1| 589|Drosophila melanogaster LD14125p pro... 27 8.2
AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p pro... 27 8.2
AY051445-1|AAK92869.1| 453|Drosophila melanogaster GH11459p pro... 27 8.2
AJ344346-1|CAC87639.1| 387|Drosophila melanogaster inwardly rec... 27 8.2
AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin recep... 27 8.2
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 27 8.2
AE014297-3331|AAF56139.3| 453|Drosophila melanogaster CG4370-PA... 27 8.2
AE014134-1243|AAF52488.1| 402|Drosophila melanogaster CG13783-P... 27 8.2
AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA... 27 8.2
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 27 8.2
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 27 8.2
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 157 bits (381), Expect = 3e-39
Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 RGYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESAD 187
+G TYPENFRAYKALIAAQYSGA VKVA +F FGETNK+ FLKKFP GKVPAFE+A+
Sbjct: 23 KGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE 82
Query: 188 GKVLLTESNAIAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
G+ L+ESNAIAY +AN+ LRGG +A+ QW S+AD+E++PASCAWVF
Sbjct: 83 GQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF 133
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 157 bits (381), Expect = 3e-39
Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 RGYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESAD 187
+G TYPENFRAYKALIAAQYSGA VKVA +F FGETNK+ FLKKFP GKVPAFE+A+
Sbjct: 32 KGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE 91
Query: 188 GKVLLTESNAIAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
G+ L+ESNAIAY +AN+ LRGG +A+ QW S+AD+E++PASCAWVF
Sbjct: 92 GQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF 142
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 157 bits (381), Expect = 3e-39
Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 RGYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESAD 187
+G TYPENFRAYKALIAAQYSGA VKVA +F FGETNK+ FLKKFP GKVPAFE+A+
Sbjct: 3 KGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE 62
Query: 188 GKVLLTESNAIAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
G+ L+ESNAIAY +AN+ LRGG +A+ QW S+AD+E++PASCAWVF
Sbjct: 63 GQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF 113
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 157 bits (381), Expect = 3e-39
Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 RGYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESAD 187
+G TYPENFRAYKALIAAQYSGA VKVA +F FGETNK+ FLKKFP GKVPAFE+A+
Sbjct: 3 KGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE 62
Query: 188 GKVLLTESNAIAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
G+ L+ESNAIAY +AN+ LRGG +A+ QW S+AD+E++PASCAWVF
Sbjct: 63 GQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF 113
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 154 bits (374), Expect = 2e-38
Identities = 75/112 (66%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 RGYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESAD 187
+G TYPENFRAYKALIAAQYSGA VKVA +F FGETNK+ FLKKFP GKVPAFE+A+
Sbjct: 3 KGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE 62
Query: 188 GKVLLTESNAIAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
G+ L+ESNAIAY +AN+ LRGG +A+ QW S+AD+E++PASCAW F
Sbjct: 63 GQ-YLSESNAIAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWDF 113
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 54.0 bits (124), Expect = 5e-08
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 218 IAYYVANDDLRGGDLA-TEARGLQWASWADSELLPASCAWVF 340
IAY +AN+ LRGG +A+ QW S+AD+E++PASCAWVF
Sbjct: 1 IAYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF 42
>AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p
protein.
Length = 226
Score = 35.9 bits (79), Expect = 0.013
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = +2
Query: 14 YFSTYPENFRAYKALIAAQYSGANVKVAP-DFVFGETNKTENFLKKFPAGKVPAFESADG 190
Y++ + RA ++ A+ G ++++ P DF E + +E F+K P ++P F +DG
Sbjct: 7 YYALFSPPARA--CILVAKLIGLDLELKPVDFAKKE-HLSEEFVKLNPQHQIPVFVDSDG 63
Query: 191 KVLLTESNAI-----AYYVANDDLRGGDLATEA 274
+V + +S+AI A Y ND L DL A
Sbjct: 64 EVYV-DSHAIVCFLVAKYAGNDQLYPRDLKRRA 95
>AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA
protein.
Length = 226
Score = 35.9 bits (79), Expect = 0.013
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = +2
Query: 14 YFSTYPENFRAYKALIAAQYSGANVKVAP-DFVFGETNKTENFLKKFPAGKVPAFESADG 190
Y++ + RA ++ A+ G ++++ P DF E + +E F+K P ++P F +DG
Sbjct: 7 YYALFSPPARA--CILVAKLIGLDLELKPVDFAKKE-HLSEEFVKLNPQHQIPVFVDSDG 63
Query: 191 KVLLTESNAI-----AYYVANDDLRGGDLATEA 274
+V + +S+AI A Y ND L DL A
Sbjct: 64 EVYV-DSHAIVCFLVAKYAGNDQLYPRDLKRRA 95
>AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p
protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.38
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 119 TNKTENFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 232
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA
protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.38
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 119 TNKTENFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 232
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AE014296-883|AAN11611.1| 184|Drosophila melanogaster CG32247-PA
protein.
Length = 184
Score = 29.9 bits (64), Expect = 0.88
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 138 KFSVLLVSPNTKSGATFTFAPEYCAAI 58
K+S++++ P++K T +PE CAA+
Sbjct: 36 KYSLIIIIPSSKGTKTVRLSPEMCAAV 62
>U35148-1|AAA79093.1| 315|Drosophila melanogaster transcription
factor IIB protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>U02879-1|AAA68626.1| 315|Drosophila melanogaster transcription
factor IIB protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>M91081-1|AAA28929.1| 315|Drosophila melanogaster RNA polymerase II
transcriptionfactor protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>M88164-1|AAA28930.1| 315|Drosophila melanogaster transcription
factor IIB protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>BT015269-1|AAT94498.1| 315|Drosophila melanogaster LD24035p
protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>BT011459-1|AAR99117.1| 315|Drosophila melanogaster RE29729p
protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>AE014134-1887|AAF52951.1| 315|Drosophila melanogaster CG5193-PA
protein.
Length = 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
PGT S SF + + + QNR +S S R+++
Sbjct: 85 PGTGSASFDAFGAPKYQNRRTMSSSDRSLI 114
>BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p
protein.
Length = 1117
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIATHVPLSPGLHLAGHHLPRSKR*HCSPS 201
P + P RP + PL+P H + H L +S++ H SPS
Sbjct: 643 PQQLAPPPQQPDSSRPASVQ-PLTPQRHASPHQLAQSQQVHQSPS 686
>AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p
protein.
Length = 1177
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIATHVPLSPGLHLAGHHLPRSKR*HCSPS 201
P + P RP + PL+P H + H L +S++ H SPS
Sbjct: 703 PQQLAPPPQQPDSSRPASVQ-PLTPQRHASPHQLAQSQQVHQSPS 746
>AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB,
isoform B protein.
Length = 1117
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIATHVPLSPGLHLAGHHLPRSKR*HCSPS 201
P + P RP + PL+P H + H L +S++ H SPS
Sbjct: 643 PQQLAPPPQQPDSSRPASVQ-PLTPQRHASPHQLAQSQQVHQSPS 686
>AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA,
isoform A protein.
Length = 1117
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIATHVPLSPGLHLAGHHLPRSKR*HCSPS 201
P + P RP + PL+P H + H L +S++ H SPS
Sbjct: 643 PQQLAPPPQQPDSSRPASVQ-PLTPQRHASPHQLAQSQQVHQSPS 686
>AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD23876
protein.
Length = 1658
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 326 RMPAAVHCQPMRPIATHVPLSPGLHLAG 243
+ P AV C P+ P+ HVP PG + G
Sbjct: 929 KKPLAVKCPPVPPLKYHVP--PGTPIGG 954
>AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA
protein.
Length = 1658
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 326 RMPAAVHCQPMRPIATHVPLSPGLHLAG 243
+ P AV C P+ P+ HVP PG + G
Sbjct: 929 KKPLAVKCPPVPPLKYHVP--PGTPIGG 954
>AY069434-1|AAL39579.1| 589|Drosophila melanogaster LD14125p
protein.
Length = 589
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIA---THVPLSPGLHLAGHHLPRSKR*HCSP 204
P P AVH + RP+ H P P LH GH P H P
Sbjct: 22 PPHMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGH--PHHLHGHAPP 66
>AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p
protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 251 GGDLATEARGLQWASWADSELLPASCAWV 337
G D+++ R +W++W+D + A C V
Sbjct: 389 GFDISSSKRMARWSAWSDWSICSAECIQV 417
>AY051445-1|AAK92869.1| 453|Drosophila melanogaster GH11459p
protein.
Length = 453
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIVRRSTPCKRGNFLDKY*STLVN 3
P SR+F+ R++ R + N+V++ +R FL +T+V+
Sbjct: 80 PSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVD 130
>AJ344346-1|CAC87639.1| 387|Drosophila melanogaster inwardly
rectifying K+ channelprotein protein.
Length = 387
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIVRRSTPCKRGNFLDKY*STLVN 3
P SR+F+ R++ R + N+V++ +R FL +T+V+
Sbjct: 14 PSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVD 64
>AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin receptor
DUnc5 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 251 GGDLATEARGLQWASWADSELLPASCAWV 337
G D+++ R +W++W+D + A C V
Sbjct: 389 GFDISSSKRMARWSAWSDWSICSAECIQV 417
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIA---THVPLSPGLHLAGHHLPRSKR*HCSP 204
P P AVH + RP+ H P P LH GH P H P
Sbjct: 226 PPHMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGH--PHHLHGHAPP 270
>AE014297-3331|AAF56139.3| 453|Drosophila melanogaster CG4370-PA,
isoform A protein.
Length = 453
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 155 PGTSSRSFQSCWSHRIQNRGLLSRSPRNIVRRSTPCKRGNFLDKY*STLVN 3
P SR+F+ R++ R + N+V++ +R FL +T+V+
Sbjct: 80 PSCRSRNFRPGSMRRVRRRAVFKNGDCNVVQKHLQRRRVRFLQDMYTTMVD 130
>AE014134-1243|AAF52488.1| 402|Drosophila melanogaster CG13783-PA
protein.
Length = 402
Score = 26.6 bits (56), Expect = 8.2
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -3
Query: 308 HCQPMRPIATHVPLSPGLHLAGHHLPRSKR*HCSPSAKLY--RRHFRMLVLYPPGTSSRS 135
H P+ + L P L + HHL R H S +++ RH + + P T +++
Sbjct: 76 HQPPIEDVEKKAFLDPQLPMQQHHLRHHNRHHASWEQRVFPSLRHQQHRLSIGPST-AKN 134
Query: 134 FQSCWSHRIQNRGLLSRSPR 75
+ + ++ GL+S R
Sbjct: 135 LMTTEAPTTRHHGLISNHSR 154
>AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA
protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 251 GGDLATEARGLQWASWADSELLPASCAWV 337
G D+++ R +W++W+D + A C V
Sbjct: 389 GFDISSSKRMARWSAWSDWSICSAECIQV 417
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIA---THVPLSPGLHLAGHHLPRSKR*HCSP 204
P P AVH + RP+ H P P LH GH P H P
Sbjct: 226 PPHMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGH--PHHLHGHAPP 270
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 335 PMRRMPAAVHCQPMRPIA---THVPLSPGLHLAGHHLPRSKR*HCSP 204
P P AVH + RP+ H P P LH GH P H P
Sbjct: 226 PPHMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGH--PHHLHGHAPP 270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,306,368
Number of Sequences: 53049
Number of extensions: 329909
Number of successful extensions: 1039
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -