Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M07
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 39 8e-04
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 39 8e-04
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 31 0.16
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 31 0.28
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 29 1.1
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 27 2.6
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 4.5
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 26 6.0
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 26 7.9
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 39.1 bits (87), Expect = 8e-04
Identities = 32/102 (31%), Positives = 46/102 (45%)
Frame = +2
Query: 32 ENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADGKVLLTES 211
+NFR K LIAA+ + V +A D + KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---GDALLFGA 57
Query: 212 NAIAYYVANDDLRGGDLATEARGLQWASWADSELLPASCAWV 337
+I ++ + A +QW +A+ LLPA +V
Sbjct: 58 ESIGLHLTG-------TSANAETVQWLQFAEGYLLPAVLGYV 92
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 39.1 bits (87), Expect = 8e-04
Identities = 32/102 (31%), Positives = 46/102 (45%)
Frame = +2
Query: 32 ENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADGKVLLTES 211
+NFR K LIAA+ + V +A D + KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---GDALLFGA 57
Query: 212 NAIAYYVANDDLRGGDLATEARGLQWASWADSELLPASCAWV 337
+I ++ + A +QW +A+ LLPA +V
Sbjct: 58 ESIGLHLTG-------TSANAETVQWLQFAEGYLLPAVLGYV 92
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +2
Query: 20 STYPENFRAYKALI--AAQYS--GANVKVAPDFVFGET--NKTENFLKKFPAGKVPAFES 181
S P FR Y AAQ + A+VK P V K + + K G+VP E
Sbjct: 21 SPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEH 80
Query: 182 ADGKVLLTESNAIAYYVANDDL 247
A+GK L+ ES I Y+ DD+
Sbjct: 81 AEGKKLVIESAVIPEYL--DDI 100
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.28
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 11 GYFSTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTEN-FLKKFPAGKVPAFESAD 187
G + Y F Y + + N+ V + V +++ N +L K P G+VPA E +
Sbjct: 97 GNYRLYSMRFCPYAQRVLIYLAKKNIPV--EVVNVNPDRSPNWYLPKSPIGRVPALE-IN 153
Query: 188 GKVLLTESNAIAYYV 232
GKV + ESN I Y+
Sbjct: 154 GKV-VWESNVIVEYL 167
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 125 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 247
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 100
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 125 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 247
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 383
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 43 RLQGVDRRTIFRGERESSPRF 105
++ G D + I++GERESS +F
Sbjct: 58 KITGPDNKEIYKGERESSGKF 78
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -1
Query: 286 LQPTCLCRQVSTSQVIICHVVSDSIALRQQNFTVGTFEC 170
+QPTC C+Q S C + Q + + T +C
Sbjct: 34 VQPTCSCQQASQQYSCSCQPSTPCSCASSQQYQLQTSQC 72
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 158 GKVPAFESADGKVLLTES--NAIAYYVANDDLRGGDLAT 268
G + A E D K+ L S N I Y++ N D D+AT
Sbjct: 275 GCISANEQGDNKIQLGYSFINEIPYFICNTDFCNYDIAT 313
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 339 KTHAQDAGSSSLSAHEAH 286
KTH+ D+G SSLS++ +H
Sbjct: 556 KTHSTDSGVSSLSSNSSH 573
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 206 PSAKLYRRHFRMLVLYPPGTSSRSFQSCWSHRIQNRGLLSRSPRNIV 66
P Y +L L P G+S++ F + + + + L+S PR V
Sbjct: 138 PHLNAYNMPPPVLPLQPQGSSNQKFSNSYGNHRSSPALMSNKPRLFV 184
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 151 ELLQEVFSLVGLTEYKIGGYFHVRPG--ILCGDQRLVS 44
E LQ++ + +GLT+ ++ G+F+ R G ++ G VS
Sbjct: 111 ESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHNSVS 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,209,354
Number of Sequences: 27780
Number of extensions: 165399
Number of successful extensions: 405
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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