Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M07
         (340 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.43 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.3  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   5.4  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   7.1  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   7.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 0.43
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 170  LVLYPPGTSSRSFQSCWSHRI 108
            ++L  PGT    F+  W HR+
Sbjct: 968  MILVGPGTGIAPFRGFWHHRL 988


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 29   PENFRAYKALIAAQYSGANVKVA 97
            PE+F A  ALI+ Q  G ++ VA
Sbjct: 1620 PEHFVASYALISNQCEGDSLNVA 1642


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 56  LIAAQYSGANVKVAPDFVFGETNKTENFLKK 148
           LIA  Y G N K+   FV  +T K  + L+K
Sbjct: 262 LIATCYGGRNRKICEAFV--KTGKKISELEK 290


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1
          alpha protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 52 GVDRRTIFRGERES 93
          G+D+RTI + E+E+
Sbjct: 33 GIDKRTIEKFEKEA 46


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation
          factor-1alpha F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 52 GVDRRTIFRGERES 93
          G+D+RTI + E+E+
Sbjct: 33 GIDKRTIEKFEKEA 46


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 150 NFFKKFSVLLVSPNTK 103
           N FKKF+ L  SP  K
Sbjct: 461 NMFKKFASLKKSPYFK 476


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 241 IICHVVSDSIALRQQ 197
           I+ HVV+   ALR+Q
Sbjct: 234 IVSHVVNHEKALREQ 248


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 150 NFFKKFSVLLVSPNTK 103
           N FKKF+ L  SP  K
Sbjct: 461 NMFKKFASLKKSPYFK 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,971
Number of Sequences: 438
Number of extensions: 2095
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)