Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M05
(262 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 93 6e-20
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 93 6e-20
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 93 6e-20
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 93 6e-20
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 93 6e-20
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 93 6e-20
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 44 3e-05
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 44 3e-05
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 44 3e-05
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 44 3e-05
BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p pro... 31 0.17
BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p pro... 31 0.17
AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA... 31 0.17
AY118310-1|AAM48339.1| 792|Drosophila melanogaster GH14382p pro... 27 4.8
AE014296-1178|AAO41273.1| 778|Drosophila melanogaster CG33171-P... 27 4.8
AE014296-1177|AAO41274.2| 792|Drosophila melanogaster CG33171-P... 27 4.8
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 26 6.3
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 26 6.3
AE013599-549|AAF59163.3| 373|Drosophila melanogaster CG2906-PA,... 26 6.3
AE013599-548|AAM68877.2| 447|Drosophila melanogaster CG2906-PB,... 26 6.3
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 92.7 bits (220), Expect = 6e-20
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3
Query: 9 SVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNPR 179
S++ S+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP +FP+DMAR R
Sbjct: 57 SIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMARNNQNR 113
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 199 KDSKASAKQPQKTQKKKEGSG 261
KD+K+SAKQPQKTQKKKEGSG
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSG 21
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 199 KDSKASAKQPQKTQKKKEGSG 261
KD+K+SAKQPQKTQKKKEGSG
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSG 25
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 199 KDSKASAKQPQKTQKKKEGSG 261
KD+K+SAKQPQKTQKKKEGSG
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSG 25
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +1
Query: 199 KDSKASAKQPQKTQKKKEGSG 261
KD+K+SAKQPQKTQKKKEGSG
Sbjct: 5 KDAKSSAKQPQKTQKKKEGSG 25
>BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p
protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 174 DSVDAPYPLGSCSWVVYGSACPS*ICYAPLCYGSRM 67
D PY LG C+W VYG+ +P+ +R+
Sbjct: 237 DGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRL 272
>BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p
protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 174 DSVDAPYPLGSCSWVVYGSACPS*ICYAPLCYGSRM 67
D PY LG C+W VYG+ +P+ +R+
Sbjct: 237 DGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRL 272
>AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA
protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 174 DSVDAPYPLGSCSWVVYGSACPS*ICYAPLCYGSRM 67
D PY LG C+W VYG+ +P+ +R+
Sbjct: 237 DGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRL 272
>AY118310-1|AAM48339.1| 792|Drosophila melanogaster GH14382p
protein.
Length = 792
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 132 PKSNFPRDMARPQNPRAEFGTREGLKG 212
P P+ P+ P+ + G REGLKG
Sbjct: 342 PGMTGPKGEMGPKGPKGDSGGREGLKG 368
>AE014296-1178|AAO41273.1| 778|Drosophila melanogaster CG33171-PC,
isoform C protein.
Length = 778
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 132 PKSNFPRDMARPQNPRAEFGTREGLKG 212
P P+ P+ P+ + G REGLKG
Sbjct: 342 PGMTGPKGEMGPKGPKGDSGGREGLKG 368
>AE014296-1177|AAO41274.2| 792|Drosophila melanogaster CG33171-PE,
isoform E protein.
Length = 792
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 132 PKSNFPRDMARPQNPRAEFGTREGLKG 212
P P+ P+ P+ + G REGLKG
Sbjct: 342 PGMTGPKGEMGPKGPKGDSGGREGLKG 368
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 93 RNRSKKDRRIRTPPKSNFPRDMARPQN 173
R+RS++DR R P+ PRD R ++
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERS 78
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 93 RNRSKKDRRIRTPPKSNFPRDMARPQN 173
R+RS++DR R P+ PRD R ++
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERS 78
>AE013599-549|AAF59163.3| 373|Drosophila melanogaster CG2906-PA,
isoform A protein.
Length = 373
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 10 QYILHSNFPSCMQNSTTACHARSIA 84
+YI +SN+ SC +ST H RS A
Sbjct: 347 KYIRYSNYLSCRLSSTDRGHIRSSA 371
>AE013599-548|AAM68877.2| 447|Drosophila melanogaster CG2906-PB,
isoform B protein.
Length = 447
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 10 QYILHSNFPSCMQNSTTACHARSIA 84
+YI +SN+ SC +ST H RS A
Sbjct: 421 KYIRYSNYLSCRLSSTDRGHIRSSA 445
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.316 0.126 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,249
Number of Sequences: 53049
Number of extensions: 253179
Number of successful extensions: 834
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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