Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_M05
(262 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 1.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 2.5
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 3.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 4.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 20 4.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 4.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 4.4
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 4.4
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 19 7.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 7.6
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 19 7.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 19 7.6
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.4 bits (43), Expect = 1.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 112 TGGSVHHPRATSQGIWRVHRILVPNSARGKDSKASAKQ 225
TGGS + PR + G +H + + KD + +Q
Sbjct: 138 TGGSCYWPRGKNLGGTTLHHGMAYHRGHRKDYERWVQQ 175
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 2.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 199 KDSKASAKQPQKTQKKKE 252
K +KAS K+ +K+ KKE
Sbjct: 597 KANKASKKKREKSSAKKE 614
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 20.6 bits (41), Expect = 3.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 6 RSVYTSFQLPKLYAKLHY 59
R YT FQ +L + HY
Sbjct: 12 RQTYTRFQTLELEKEFHY 29
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 20.2 bits (40), Expect = 4.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 170 LWTRHIPWEVALGWCTDPPV 111
+W RHI A+G+ D PV
Sbjct: 635 VWGRHIYDGRAMGFPLDKPV 654
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.2 bits (40), Expect = 4.4
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = +1
Query: 7 GQYILHSNFPSCM 45
G Y+ H+ P+C+
Sbjct: 245 GYYLFHTYIPTCL 257
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 20.2 bits (40), Expect = 4.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 170 LWTRHIPWEVALGWCTDPPV 111
+W RHI A+G+ D PV
Sbjct: 635 VWGRHIYDGRAMGFPLDKPV 654
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.2 bits (40), Expect = 4.4
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = +1
Query: 193 RGKDSKASAKQPQK 234
+G+D K+++K+P++
Sbjct: 429 KGRDKKSTSKKPRR 442
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.2 bits (40), Expect = 4.4
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3
Query: 57 YCVSCAIH 80
YCV+C +H
Sbjct: 542 YCVACGLH 549
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 19.4 bits (38), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 6 RSVYTSFQLPKLYAKLHY 59
R YT +Q +L + HY
Sbjct: 12 RQTYTRYQTLELEKEFHY 29
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.4 bits (38), Expect = 7.6
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3
Query: 54 HYCVSCAIHSK 86
H C +C HSK
Sbjct: 277 HSCEACPAHSK 287
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 19.4 bits (38), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 6 RSVYTSFQLPKLYAKLHY 59
R YT +Q +L + HY
Sbjct: 274 RQTYTRYQTLELEKEFHY 291
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 19.4 bits (38), Expect = 7.6
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 173 ILWTRHIPW 147
++WT IPW
Sbjct: 168 LIWTYTIPW 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.126 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,591
Number of Sequences: 438
Number of extensions: 1581
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4762122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
- SilkBase 1999-2023 -