Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_M04
         (112 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   1.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    20   9.1  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    20   9.1  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 21  GTSVPRASLLSPRRGRLIPFHIINLRE 101
           G S+P+ +LLS   G +  F+ I L+E
Sbjct: 350 GDSIPQRALLSCAFGAVFIFNYIPLQE 376


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 13  SHRARAYLAQVSSRRAGGASFHST 84
           SH  RA+L + SS     +  ++T
Sbjct: 86  SHEVRAFLLKNSSHSGASSGLNTT 109


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 13  SHRARAYLAQVSSRRAGGASFH 78
           +HR    +    SR+ G  SFH
Sbjct: 894 AHRVLPNIGSWQSRKHGDVSFH 915


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,954
Number of Sequences: 2352
Number of extensions: 1062
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 17
effective length of database: 523,995
effective search space used:  9955905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)