Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L24
(274 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000F2C4FC Cluster: PREDICTED: similar to Zona pellu... 31 5.0
UniRef50_UPI0000DA4294 Cluster: PREDICTED: hypothetical protein;... 31 5.0
UniRef50_UPI0000DC0BE1 Cluster: transmembrane and coiled-coil do... 31 5.0
UniRef50_A0TC59 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_A7MB72 Cluster: MGC166429 protein; n=4; Tetrapoda|Rep: ... 31 6.6
UniRef50_Q0V4X2 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 6.6
UniRef50_P36286 Cluster: Non-structural polyprotein [Contains: U... 31 6.6
UniRef50_A6FNM3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q9VHP9 Cluster: CG31258-PA; n=2; Drosophila melanogaste... 30 8.7
>UniRef50_UPI0000F2C4FC Cluster: PREDICTED: similar to Zona
pellucida sperm-binding protein 3 precursor (Zona
pellucida glycoprotein ZP3) (Zona pellucida protein C)
(Sperm receptor) (ZP3A/ZP3B); n=1; Monodelphis
domestica|Rep: PREDICTED: similar to Zona pellucida
sperm-binding protein 3 precursor (Zona pellucida
glycoprotein ZP3) (Zona pellucida protein C) (Sperm
receptor) (ZP3A/ZP3B) - Monodelphis domestica
Length = 272
Score = 31.1 bits (67), Expect = 5.0
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = -2
Query: 210 IPNKSRRLHRSQCPSRRGMKSGIEYHQLWV----VQSPPADRAVRLSRE-PLEPGPPIQR 46
IPN+SRR S + K QL V V + P AV SR PLEP P
Sbjct: 178 IPNRSRRRLSVDRISAKPWKRTAPLQQLQVREADVTAGPMFLAVNFSRHTPLEPNPDFME 237
Query: 45 ESTGNAYRRPLVALV 1
+ T L+ALV
Sbjct: 238 KYTAFGLSLSLIALV 252
>UniRef50_UPI0000DA4294 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 973
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +1
Query: 67 LERLP*QTNSPISWRRLYNPQLMILYS*LHSTTGRTLTPVETTTFIRNYSVEEPELVPDI 246
L P Q+ SP S+ + PQ++ L+ T R V TTTF E PEL P
Sbjct: 360 LASCPQQSLSPESYYKDICPQILDLFHLQDKLTARQFQRVATTTFTTMLR-ERPELAPKY 418
Query: 247 L 249
L
Sbjct: 419 L 419
>UniRef50_UPI0000DC0BE1 Cluster: transmembrane and coiled-coil
domains 7; n=1; Rattus norvegicus|Rep: transmembrane and
coiled-coil domains 7 - Rattus norvegicus
Length = 1075
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +1
Query: 67 LERLP*QTNSPISWRRLYNPQLMILYS*LHSTTGRTLTPVETTTFIRNYSVEEPELVPDI 246
L P Q+ SP S+ + PQ++ L+ T R V TTTF E PEL P
Sbjct: 360 LASCPQQSLSPESYYKDICPQILDLFHLQDKLTARQFQRVATTTFTTMLR-ERPELAPKY 418
Query: 247 L 249
L
Sbjct: 419 L 419
>UniRef50_A0TC59 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 540
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 198 SRRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE 43
SRRL Q R G + E+H L + ADR +++R + GPP+ RE
Sbjct: 114 SRRLVDDQ-HLRTGRQPLAEHHLLLIAARQRADRQRQVARFQAQAGPPLMRE 164
>UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1202
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2
Query: 186 HRSQCPSRRGMKSGIEYHQLWVVQS--PPADRAVRLSREPLEPGPPIQRESTGNAYRRPL 13
H+S PS G S +YHQ W P A L P P PP T ++Y P
Sbjct: 116 HQSSIPSYGGGVSSGDYHQQWASNPTYAPQQPATSLPPPPPPPPPPPVTVDT-SSYHNPA 174
Query: 12 VAL 4
+++
Sbjct: 175 LSV 177
>UniRef50_A7MB72 Cluster: MGC166429 protein; n=4; Tetrapoda|Rep:
MGC166429 protein - Bos taurus (Bovine)
Length = 813
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 201 KSRRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPG 61
+ RR S+ PSR G + + L + PP+ A R SR EPG
Sbjct: 452 RGRRQSPSKSPSRYGHPTSLPRPGLLAPELPPSPEASRPSRPEAEPG 498
>UniRef50_Q0V4X2 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 187
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 135 HQLWVVQSPPADRAVRLSREPLEPGPPIQRESTG-NAYRRPLVA 7
H LW+ + PP R S P P P R + + Y+ PL A
Sbjct: 81 HNLWLKRPPPPQRPAPFSLGPASPSPKDARSARPVSGYKYPLFA 124
>UniRef50_P36286 Cluster: Non-structural polyprotein [Contains:
Unknown protein; Helicase (2C- like protein) (P2C);
3A-like protein; Viral genome-linked protein (VPg);
Thiol protease P3C (EC 3.4.22.-) (3C-like protease)
(3C-pro); RNA-directed RNA polymerase (EC 2.7.7.48)];
n=135; root|Rep: Non-structural polyprotein [Contains:
Unknown protein; Helicase (2C- like protein) (P2C);
3A-like protein; Viral genome-linked protein (VPg);
Thiol protease P3C (EC 3.4.22.-) (3C-like protease)
(3C-pro); RNA-directed RNA polymerase (EC 2.7.7.48)] -
San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV
serotype 1)
Length = 1879
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 126 WVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPL 13
W+V+ P D R R+P+ P +R T N Y R L
Sbjct: 32 WMVRCGPLDHDSRHGRDPVRASPQAKRVRTPNPYPRHL 69
>UniRef50_A6FNM3 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
protein - Roseobacter sp. AzwK-3b
Length = 500
Score = 30.3 bits (65), Expect = 8.7
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -2
Query: 117 QSPPADRAVRLSREPLEPGPPIQRESTG 34
++PP++ A+ +S EP +P PP +++G
Sbjct: 135 EAPPSEGALSISTEPAQPAPPEIEDNSG 162
>UniRef50_Q9VHP9 Cluster: CG31258-PA; n=2; Drosophila
melanogaster|Rep: CG31258-PA - Drosophila melanogaster
(Fruit fly)
Length = 1399
Score = 30.3 bits (65), Expect = 8.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 180 SQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPLVA 7
S P K + + V PA++ + LS+EP EP P+Q + T A R P++A
Sbjct: 175 SSTPCTEKQKEEVAKNTTRVETDKPAEKPMELSQEP-EPENPLQTKVTSPA-RNPILA 230
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,877,912
Number of Sequences: 1657284
Number of extensions: 3665419
Number of successful extensions: 11515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11510
length of database: 575,637,011
effective HSP length: 68
effective length of database: 462,941,699
effective search space used: 10184717378
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -