Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L24
         (274 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   2.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        21   8.3  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = +2

Query: 5    RATSGRRYAFPVDSRCIXXXXXXXXXXXXTA--RSAGG--DCTT 124
            +AT GR++ + V S C+            T+  R AG   +CT+
Sbjct: 1300 KATDGRQHEYAVPSNCLLDTTHETYNTTATSCERIAGETFECTS 1343


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/53 (18%), Positives = 21/53 (39%)
 Frame = -2

Query: 255 HGQYIGN*LRFFNRIIPNKSRRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADR 97
           HG+      R    +      + HR    ++  + S  ++ Q+W     PA++
Sbjct: 44  HGRNGDKRSRMIKELYQQTEPKSHRPSYANKAVLLSSAKWEQMWKKVVSPAEK 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,767
Number of Sequences: 2352
Number of extensions: 3694
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15730956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)