Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L24
(274 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p pro... 30 0.38
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA... 30 0.38
AY121661-1|AAM51988.1| 650|Drosophila melanogaster RE10344p pro... 28 2.0
AE013599-2329|AAF57964.2| 650|Drosophila melanogaster CG30463-P... 28 2.0
AE013599-2328|AAF57966.2| 650|Drosophila melanogaster CG30463-P... 28 2.0
AE014134-2786|AAF53572.2| 473|Drosophila melanogaster CG13280-P... 27 3.6
U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase... 26 8.3
AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p pro... 26 8.3
AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA... 26 8.3
>BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p
protein.
Length = 946
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 180 SQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPLVA 7
S P K + + V PA++ + LS+EP EP P+Q + T A R P++A
Sbjct: 175 SSTPCTEKQKEEVAKNTTRVETDKPAEKPMELSQEP-EPENPLQTKVTSPA-RNPILA 230
>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 180 SQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPLVA 7
S P K + + V PA++ + LS+EP EP P+Q + T A R P++A
Sbjct: 175 SSTPCTEKQKEEVAKNTTRVETDKPAEKPMELSQEP-EPENPLQTKVTSPA-RNPILA 230
>AY121661-1|AAM51988.1| 650|Drosophila melanogaster RE10344p
protein.
Length = 650
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 101 IGLFVCHGSRSSQGHQYNESQREMH 27
+ LF CHG + +Q Y E+ +++H
Sbjct: 585 VTLFGCHGGKGNQFWTYRENTKQLH 609
>AE013599-2329|AAF57964.2| 650|Drosophila melanogaster CG30463-PB,
isoform B protein.
Length = 650
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 101 IGLFVCHGSRSSQGHQYNESQREMH 27
+ LF CHG + +Q Y E+ +++H
Sbjct: 585 VTLFGCHGGKGNQFWTYRENTKQLH 609
>AE013599-2328|AAF57966.2| 650|Drosophila melanogaster CG30463-PA,
isoform A protein.
Length = 650
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 101 IGLFVCHGSRSSQGHQYNESQREMH 27
+ LF CHG + +Q Y E+ +++H
Sbjct: 585 VTLFGCHGGKGNQFWTYRENTKQLH 609
>AE014134-2786|AAF53572.2| 473|Drosophila melanogaster CG13280-PA
protein.
Length = 473
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 204 NKSRRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADR 97
++ R+LH ++ PS + GI +WVV P R
Sbjct: 58 HRPRQLHINRFPSSKAASKGILERGVWVVDEGPTLR 93
>U60298-1|AAC47290.1| 1145|Drosophila melanogaster DNA polymerase
gamma protein.
Length = 1145
Score = 25.8 bits (54), Expect = 8.3
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 216 RIIPNKSRRLHRSQC--PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE 43
R + K + L+ Q P+RR + G + + PPA RA + + EP P E
Sbjct: 488 RRLQAKFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASE 547
Query: 42 -STGNAYRRPLVAL 4
STG L++L
Sbjct: 548 ISTGMQIAPKLLSL 561
>AY089226-1|AAL89964.1| 1145|Drosophila melanogaster AT02241p
protein.
Length = 1145
Score = 25.8 bits (54), Expect = 8.3
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 216 RIIPNKSRRLHRSQC--PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE 43
R + K + L+ Q P+RR + G + + PPA RA + + EP P E
Sbjct: 488 RRLQAKFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASE 547
Query: 42 -STGNAYRRPLVAL 4
STG L++L
Sbjct: 548 ISTGMQIAPKLLSL 561
>AE014134-2406|AAF53338.1| 1145|Drosophila melanogaster CG8987-PA
protein.
Length = 1145
Score = 25.8 bits (54), Expect = 8.3
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 216 RIIPNKSRRLHRSQC--PSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRE 43
R + K + L+ Q P+RR + G + + PPA RA + + EP P E
Sbjct: 488 RRLQAKFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASE 547
Query: 42 -STGNAYRRPLVAL 4
STG L++L
Sbjct: 548 ISTGMQIAPKLLSL 561
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,429,615
Number of Sequences: 53049
Number of extensions: 173966
Number of successful extensions: 579
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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