Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L23
         (187 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     21   6.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    20   9.1  

>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 55  FNLVKIKNTFKYYYFL 102
           FNLV+ +N  K++Y L
Sbjct: 122 FNLVESENFKKFFYTL 137


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 2   GCMNSARGIYFVM*TFF 52
           GCM   +G+ FV   FF
Sbjct: 537 GCMARDKGLIFVASDFF 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,176
Number of Sequences: 2352
Number of extensions: 1572
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 40
effective length of database: 469,899
effective search space used:  9867879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)