Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L22
(276 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5K881 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_UPI00015B472B Cluster: PREDICTED: hypothetical protein;... 31 5.0
UniRef50_Q8BCV8 Cluster: 25K protein; n=1; Mirafiore lettuce vir... 31 6.6
UniRef50_Q92U34 Cluster: Putative uncharacterized protein SMb214... 31 6.6
UniRef50_A3QI01 Cluster: Transcriptional regulator, Crp/Fnr fami... 31 6.6
UniRef50_A0M4P9 Cluster: Putative uncharacterized protein; n=4; ... 31 6.6
UniRef50_Q4MZ42 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q8XQK7 Cluster: Probable pseudogene; n=4; Ralstonia sol... 30 8.7
UniRef50_Q87PV2 Cluster: Putative uncharacterized protein VP1399... 30 8.7
UniRef50_A4AXY2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A5DE25 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q84TX2 Cluster: SCAR-like protein 1; n=7; Oryza sativa|... 30 8.7
>UniRef50_A5K881 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 539
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 29 IQKEERRKSFAHIENDHCYLATPARDSPTSDS-NSVASVEIKKESSLYEQLC 181
I+KE+++K+F IE + L + + S+ N AS EI + + QLC
Sbjct: 82 IEKEKKKKNFTEIEKSYYNLVSGNNEGDISNCLNDFASEEIHVQGQIAYQLC 133
>UniRef50_UPI00015B472B Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 2069
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 2 HEGLLRTEFIQKEERRKSFAHIENDHCYLATPA 100
H+GLL +++KEE +K+ E H L PA
Sbjct: 261 HDGLLGRNYLKKEEAKKNTERREKGHIILTKPA 293
>UniRef50_Q8BCV8 Cluster: 25K protein; n=1; Mirafiore lettuce
virus|Rep: 25K protein - Mirafiore lettuce virus
Length = 211
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 107 SPTSDSNSVASVEIKKESSLYEQLCSVTYRFDSVRAGVNYMLKRIPLISDHA 262
S ++D+NS I KE + + L + + +R +NY +K +P I DH+
Sbjct: 24 SGSTDTNSEMKTVISKEKNEEKSLVKTKNKVNRIRLFLNYHVKELP-IMDHS 74
>UniRef50_Q92U34 Cluster: Putative uncharacterized protein SMb21482;
n=1; Sinorhizobium meliloti|Rep: Putative
uncharacterized protein SMb21482 - Rhizobium meliloti
(Sinorhizobium meliloti)
Length = 100
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 182 SVTYRFDSVRAGVNYMLKRIPLISDHARDP 271
S YR V A +N L+ +P++ DH DP
Sbjct: 35 SALYRHKDVWAEINRALEDVPIVQDHEEDP 64
>UniRef50_A3QI01 Cluster: Transcriptional regulator, Crp/Fnr family;
n=1; Shewanella loihica PV-4|Rep: Transcriptional
regulator, Crp/Fnr family - Shewanella loihica (strain
BAA-1088 / PV-4)
Length = 256
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 86 LATPARDSPTSDSNSVASVEIKKESSLYEQLCSVTYRFDSVRAGVNYMLKR 238
LA P SP SD S+A E SSL +QL SVT RF ++ Y+L++
Sbjct: 28 LADPDTSSPFSDVLSIA--ESGCSSSLLQQLTSVTKRFRHLKP-EQYLLRQ 75
>UniRef50_A0M4P9 Cluster: Putative uncharacterized protein; n=4;
Flavobacteria|Rep: Putative uncharacterized protein -
Gramella forsetii (strain KT0803)
Length = 691
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +2
Query: 2 HEGLLRTEFIQKEERRKSFAHIENDHCYLATPARDSPTSDSNSVASVEIKKESSLYEQLC 181
HEGL+ + ++ + + F + ND Y+ A+ ++ +A++E E+ E L
Sbjct: 81 HEGLICKDNMRADIKVAFFVRVNNDIEYIKKVAQTIGVDRASKIATLEDLFEAKFSEALK 140
Query: 182 SVTYRFDSV 208
+V +FD +
Sbjct: 141 TVGKKFDFI 149
>UniRef50_Q4MZ42 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1228
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 23 EFIQKEERRKSFAHIENDHCYL--ATPARDSPTSDSNSVASVEIKKESS 163
EFI+ K F +EN C L A+P DSP S++ S ++K+ S
Sbjct: 16 EFIKANSNDKFFVDVENPSCKLVSASPKADSPQSNT-SPKGARLRKDIS 63
>UniRef50_Q8XQK7 Cluster: Probable pseudogene; n=4; Ralstonia
solanacearum|Rep: Probable pseudogene - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 599
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 86 LATPARDSPTSDSNSVASVEIKKESSLYEQLCSVTYRFDSVRAGVNYML 232
LAT + SP + ++ V + E +L EQLC+V R D A N L
Sbjct: 297 LATIRKQSPGAQQRALLQVLRQGERALAEQLCAVVDRADRADAAGNTAL 345
>UniRef50_Q87PV2 Cluster: Putative uncharacterized protein VP1399;
n=5; Vibrio|Rep: Putative uncharacterized protein VP1399
- Vibrio parahaemolyticus
Length = 314
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 ASVEIKKESSLYEQLCSVTYR-FDSVRAGVNYMLKRIPLI 250
A +E KES L+E+ C +T DS+ + LK IPL+
Sbjct: 51 AKIEYTKESDLFEKTCELTANLLDSLLTQLPRSLKPIPLL 90
>UniRef50_A4AXY2 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 248
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 38 EERRKSFAHIENDHCYLA--TPARDSPTSDSNSVA-SVEIKKESSLYEQLCSVTYRFDSV 208
EE + + +E + Y A P++DSP D N++ +++E+ + L + F +
Sbjct: 91 EEGQAHLSSMEAEQAYTAGKAPSKDSPRKDGNAIQHDFMLQREAIDLKTLINTLNGFSQL 150
Query: 209 RAGVNYMLKRIPLISD 256
++ Y K+I +S+
Sbjct: 151 QSDKGYFFKKIVGLSN 166
>UniRef50_A5DE25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 241
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/49 (24%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +2
Query: 35 KEERRKSFAHIENDHCYLATPARDSPTS-DSNSVASVEIKKESSLYEQL 178
K++ KS+ H+ ++ ++TP+ +P S + + A+ ++++E S+ E++
Sbjct: 147 KDDLTKSYIHVSDEESSVSTPSSSAPGSPQTTASATKDLEQELSIEEEV 195
>UniRef50_Q84TX2 Cluster: SCAR-like protein 1; n=7; Oryza sativa|Rep:
SCAR-like protein 1 - Oryza sativa subsp. japonica (Rice)
Length = 2097
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 IQKEERRKSFAHIENDHCYLATPAR--DSPTSDSNSVASVEIKKES 160
+ EE +SF H ++ ATP D P SDSN V+S + ES
Sbjct: 1126 VMTEEDFRSFCHEYHEMDLTATPESIDDKPASDSNVVSSSLVTSES 1171
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,077,847
Number of Sequences: 1657284
Number of extensions: 3297748
Number of successful extensions: 9466
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9461
length of database: 575,637,011
effective HSP length: 69
effective length of database: 461,284,415
effective search space used: 10148257130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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