Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L22
         (276 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   1.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   1.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    19   7.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   9.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 2   HEGLLRTEFIQKEERRKSFAHIEND 76
           +E +LR E ++KE++      I ND
Sbjct: 371 NEAVLRIESVRKEDKGMYQCFIRND 395


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 86  LATPARDSPTSDSNSVASVEIKKES 160
           +ATP      S S S  +V IKKES
Sbjct: 218 VATPTGIPTPSTSASPPTVNIKKES 242


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 8   GLLRTEFIQKEERRKSFAHI 67
           G ++ E  QKE+  K F H+
Sbjct: 69  GCVKCEQKQKEDVHKVFQHL 88


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 49  EKLCTYRERSLLLSDPGEGLPD 114
           E+LC   +R + LS+  E LP+
Sbjct: 246 ERLCNGLKRVVKLSNWREPLPE 267


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +2

Query: 77  HCYLAT 94
           HCYLAT
Sbjct: 817 HCYLAT 822


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,459
Number of Sequences: 336
Number of extensions: 952
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4577651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)