Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L21
         (127 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    20   3.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   4.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   4.2  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 52  KYNYTNRIQY 23
           KYNY N+  Y
Sbjct: 97  KYNYNNKYNY 106


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 2   IGRGAYDILYA 34
           IGRG Y I++A
Sbjct: 600 IGRGQYGIVFA 610


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 2   IGRGAYDILYA 34
           IGRG Y I++A
Sbjct: 638 IGRGQYGIVFA 648


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,390
Number of Sequences: 438
Number of extensions: 261
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 22
effective length of database: 136,707
effective search space used:  2597433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)