Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L20
(191 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041379-1|AAH41379.1| 240|Homo sapiens transmembrane protein 6... 34 0.093
AK056455-1|BAB71189.1| 150|Homo sapiens protein ( Homo sapiens ... 29 3.5
Z29093-1|CAA82335.1| 876|Homo sapiens receptor tyrosine kinase ... 28 4.6
X98208-1|CAA66871.1| 913|Homo sapiens discoidin receptor tyrosi... 28 4.6
X74979-1|CAA52915.1| 876|Homo sapiens TrkE protein. 28 4.6
U48705-1|AAC50917.1| 913|Homo sapiens tyrosine kinase DDR protein. 28 4.6
L57508-1|AAB05208.1| 876|Homo sapiens receptor kinase protein. 28 4.6
L20817-1|AAA18019.1| 913|Homo sapiens tyrosine protein kinase p... 28 4.6
L11315-1|AAA02866.1| 913|Homo sapiens receptor tyrosine kinase ... 28 4.6
DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1, ... 28 4.6
BC070070-1|AAH70070.1| 876|Homo sapiens DDR1 protein protein. 28 4.6
BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1, ... 28 4.6
BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1, ... 28 4.6
BC013400-1|AAH13400.1| 876|Homo sapiens discoidin domain recept... 28 4.6
BC008716-1|AAH08716.1| 876|Homo sapiens discoidin domain recept... 28 4.6
BA000025-66|BAB63318.1| 913|Homo sapiens Receptor tyrosine kina... 28 4.6
AL773589-2|CAI18534.1| 876|Homo sapiens discoidin domain recept... 28 4.6
AL773589-1|CAI18533.1| 913|Homo sapiens discoidin domain recept... 28 4.6
AL773541-2|CAI18450.1| 876|Homo sapiens discoidin domain recept... 28 4.6
AL773541-1|CAI18451.1| 913|Homo sapiens discoidin domain recept... 28 4.6
AL662870-8|CAM25687.1| 493|Homo sapiens discoidin domain recept... 28 4.6
AL662870-7|CAI18441.1| 876|Homo sapiens discoidin domain recept... 28 4.6
AL662870-6|CAI18442.1| 913|Homo sapiens discoidin domain recept... 28 4.6
AL662854-8|CAM24838.1| 493|Homo sapiens discoidin domain recept... 28 4.6
AL662854-7|CAI17433.1| 913|Homo sapiens discoidin domain recept... 28 4.6
AL662854-6|CAI17434.1| 876|Homo sapiens discoidin domain recept... 28 4.6
AK130776-1|BAC85426.1| 441|Homo sapiens protein ( Homo sapiens ... 28 4.6
AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens ... 28 4.6
AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis ... 28 4.6
AB210021-1|BAE06103.1| 894|Homo sapiens DDR1 variant protein pr... 28 4.6
AB202100-1|BAE78621.1| 876|Homo sapiens discoidin domain recept... 28 4.6
AB103608-1|BAF31270.1| 913|Homo sapiens DDR protein protein. 28 4.6
AB088102-1|BAC54935.1| 913|Homo sapiens receptor tyrosine kinas... 28 4.6
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine... 27 8.1
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein. 27 8.1
BC150330-1|AAI50331.1| 1030|Homo sapiens KRAB-A domain containin... 27 8.1
BC146667-1|AAI46668.1| 1029|Homo sapiens KRBA1 protein protein. 27 8.1
BC142722-1|AAI42723.1| 1029|Homo sapiens KRBA1 protein protein. 27 8.1
BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein. 27 8.1
BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein. 27 8.1
BC103827-1|AAI03828.1| 440|Homo sapiens golgi reassembly stacki... 27 8.1
BC103826-1|AAI03827.1| 440|Homo sapiens golgi reassembly stacki... 27 8.1
BC075854-1|AAH75854.1| 440|Homo sapiens golgi reassembly stacki... 27 8.1
BC041587-1|AAH41587.1| 669|Homo sapiens KRBA1 protein protein. 27 8.1
BC033229-1|AAH33229.1| 669|Homo sapiens KRBA1 protein protein. 27 8.1
BC029416-1|AAH29416.1| 127|Homo sapiens GDPD5 protein protein. 27 8.1
BC020203-1|AAH20203.1| 127|Homo sapiens GDPD5 protein protein. 27 8.1
AK091168-1|BAC03598.1| 246|Homo sapiens protein ( Homo sapiens ... 27 8.1
AK075032-1|BAC11364.1| 524|Homo sapiens protein ( Homo sapiens ... 27 8.1
AJ409349-1|CAC35160.1| 440|Homo sapiens golgi perepheral membra... 27 8.1
AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein. 27 8.1
AF217989-1|AAG17232.1| 127|Homo sapiens unknown protein. 27 8.1
AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1 (s... 27 8.1
AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein. 27 8.1
AB058765-1|BAB47491.2| 1070|Homo sapiens KIAA1862 protein protein. 27 8.1
>BC041379-1|AAH41379.1| 240|Homo sapiens transmembrane protein 65
protein.
Length = 240
Score = 33.9 bits (74), Expect = 0.093
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 128 PRGAPPPRPIGWYCCAYGSLS*APATGAP 42
P A PRP W CC G L+ AP G P
Sbjct: 20 PAAAAAPRPPSWCCCGRGLLALAPPGGLP 48
>AK056455-1|BAB71189.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ31893 fis, clone NT2RP7003632, weakly similar to
Microfilarial sheath protein. ).
Length = 150
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 155 GTIPPASSLPRGAPPPRP 102
GT PP LP+GAP P P
Sbjct: 87 GTDPPCHRLPKGAPQPLP 104
>Z29093-1|CAA82335.1| 876|Homo sapiens receptor tyrosine kinase
protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>X98208-1|CAA66871.1| 913|Homo sapiens discoidin receptor tyrosine
kinase protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>X74979-1|CAA52915.1| 876|Homo sapiens TrkE protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>U48705-1|AAC50917.1| 913|Homo sapiens tyrosine kinase DDR protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>L57508-1|AAB05208.1| 876|Homo sapiens receptor kinase protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>L20817-1|AAA18019.1| 913|Homo sapiens tyrosine protein kinase
protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>L11315-1|AAA02866.1| 913|Homo sapiens receptor tyrosine kinase
protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 RSLR*YLRGTIPPASSLPRGAPPPRPI 99
RS + R +PP+S PRGAP RPI
Sbjct: 344 RSWQPVSRIPMPPSSPQPRGAPRQRPI 370
>BC070070-1|AAH70070.1| 876|Homo sapiens DDR1 protein protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 RSLR*YLRGTIPPASSLPRGAPPPRPI 99
RS + R +PP+S PRGAP RPI
Sbjct: 344 RSWQPVSRIPMPPSSPQPRGAPRQRPI 370
>BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 RSLR*YLRGTIPPASSLPRGAPPPRPI 99
RS + R +PP+S PRGAP RPI
Sbjct: 344 RSWQPVSRIPMPPSSPQPRGAPRQRPI 370
>BC013400-1|AAH13400.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>BC008716-1|AAH08716.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>BA000025-66|BAB63318.1| 913|Homo sapiens Receptor tyrosine kinase
protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL773589-2|CAI18534.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL773589-1|CAI18533.1| 913|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL773541-2|CAI18450.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL773541-1|CAI18451.1| 913|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL662870-8|CAM25687.1| 493|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 172 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 218
>AL662870-7|CAI18441.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL662870-6|CAI18442.1| 913|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL662854-8|CAM24838.1| 493|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 172 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 218
>AL662854-7|CAI17433.1| 913|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AL662854-6|CAI17434.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AK130776-1|BAC85426.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ27266 fis, clone TMS00356, highly similar to
Epithelial discoidin domain receptor 1 precursor (EC
2.7.1.112). ).
Length = 441
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 107 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 153
>AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ26816 fis, clone PRS06437. ).
Length = 508
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 RSLR*YLRGTIPPASSLPRGAPPPRPI 99
RS + R +PP+S PRGAP RPI
Sbjct: 344 RSWQPVSRIPMPPSSPQPRGAPRQRPI 370
>AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis
stimulating protein of p53 protein.
Length = 828
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 RSLR*YLRGTIPPASSLPRGAPPPRPI 99
RS + R +PP+S PRGAP RPI
Sbjct: 344 RSWQPVSRIPMPPSSPQPRGAPRQRPI 370
>AB210021-1|BAE06103.1| 894|Homo sapiens DDR1 variant protein
protein.
Length = 894
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 394 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 440
>AB202100-1|BAE78621.1| 876|Homo sapiens discoidin domain receptor
family, member 1 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AB103608-1|BAF31270.1| 913|Homo sapiens DDR protein protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>AB088102-1|BAC54935.1| 913|Homo sapiens receptor tyrosine kinase
protein.
Length = 913
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 161 LRGTIPPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPRAWVSVGC 18
L GT PPA P G PP G A A G+P A + +GC
Sbjct: 376 LGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTA-ILIGC 422
>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
receptor protein.
Length = 5038
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 158 RGTIPPASSLPRGAPPP 108
RG P S+LP GAPPP
Sbjct: 3287 RGPEAPPSALPAGAPPP 3303
>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
Length = 5032
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 158 RGTIPPASSLPRGAPPP 108
RG P S+LP GAPPP
Sbjct: 3286 RGPEAPPSALPAGAPPP 3302
>BC150330-1|AAI50331.1| 1030|Homo sapiens KRAB-A domain containing 1
protein.
Length = 1030
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 896 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 928
>BC146667-1|AAI46668.1| 1029|Homo sapiens KRBA1 protein protein.
Length = 1029
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 895 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 927
>BC142722-1|AAI42723.1| 1029|Homo sapiens KRBA1 protein protein.
Length = 1029
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 895 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 927
>BC104916-1|AAI04917.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 155 GTIPPASSLPRGAPPPRPI 99
GTIP ++P+GA PRP+
Sbjct: 320 GTIPIVQAVPQGAETPRPL 338
>BC104914-1|AAI04915.1| 852|Homo sapiens SHROOM1 protein protein.
Length = 852
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 155 GTIPPASSLPRGAPPPRPI 99
GTIP ++P+GA PRP+
Sbjct: 320 GTIPIVQAVPQGAETPRPL 338
>BC103827-1|AAI03828.1| 440|Homo sapiens golgi reassembly stacking
protein 1, 65kDa protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 146 PPASSLPRGAPPP 108
PP S+LP GAPPP
Sbjct: 217 PPPSALPLGAPPP 229
>BC103826-1|AAI03827.1| 440|Homo sapiens golgi reassembly stacking
protein 1, 65kDa protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 146 PPASSLPRGAPPP 108
PP S+LP GAPPP
Sbjct: 217 PPPSALPLGAPPP 229
>BC075854-1|AAH75854.1| 440|Homo sapiens golgi reassembly stacking
protein 1, 65kDa protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 146 PPASSLPRGAPPP 108
PP S+LP GAPPP
Sbjct: 217 PPPSALPLGAPPP 229
>BC041587-1|AAH41587.1| 669|Homo sapiens KRBA1 protein protein.
Length = 669
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 535 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 567
>BC033229-1|AAH33229.1| 669|Homo sapiens KRBA1 protein protein.
Length = 669
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 535 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 567
>BC029416-1|AAH29416.1| 127|Homo sapiens GDPD5 protein protein.
Length = 127
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 149 IPPASSLPRGAPPPRPIG 96
+PP + PR P PRP+G
Sbjct: 81 MPPPTPCPRSGPEPRPLG 98
>BC020203-1|AAH20203.1| 127|Homo sapiens GDPD5 protein protein.
Length = 127
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 149 IPPASSLPRGAPPPRPIG 96
+PP + PR P PRP+G
Sbjct: 81 MPPPTPCPRSGPEPRPLG 98
>AK091168-1|BAC03598.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ33849 fis, clone CTONG2005585, moderately
similar to Rattus norvegicus golgi peripheral membrane
protein p65 ).
Length = 246
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 146 PPASSLPRGAPPP 108
PP S+LP GAPPP
Sbjct: 144 PPPSALPLGAPPP 156
>AK075032-1|BAC11364.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ90551 fis, clone OVARC1000779, weakly similar to
ZINC FINGER PROTEIN 157. ).
Length = 524
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 172 CASTSAGPSLRRVLYRAALRPRVP*AGTVARTDLCRKLPLQVLPA 38
C + +A P R V + R AG A LCR+LPL P+
Sbjct: 409 CPAAAARPGARAVPPLGHRQARAQRAGRGAPQPLCRELPLSSRPS 453
>AJ409349-1|CAC35160.1| 440|Homo sapiens golgi perepheral membrane
protein, p65 protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 146 PPASSLPRGAPPP 108
PP S+LP GAPPP
Sbjct: 217 PPPSALPLGAPPP 229
>AF314142-1|AAM15526.1| 847|Homo sapiens apical protein 2 protein.
Length = 847
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 155 GTIPPASSLPRGAPPPRPI 99
GTIP ++P+GA PRP+
Sbjct: 320 GTIPIVQAVPQGAETPRPL 338
>AF217989-1|AAG17232.1| 127|Homo sapiens unknown protein.
Length = 127
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 149 IPPASSLPRGAPPPRPIG 96
+PP + PR P PRP+G
Sbjct: 81 MPPPTPCPRSGPEPRPLG 98
>AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1
(skeletal) variant protein.
Length = 1231
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 158 RGTIPPASSLPRGAPPP 108
RG P S+LP GAPPP
Sbjct: 232 RGPEAPPSALPAGAPPP 248
>AB075840-1|BAB85546.1| 871|Homo sapiens KIAA1960 protein protein.
Length = 871
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 155 GTIPPASSLPRGAPPPRPI 99
GTIP ++P+GA PRP+
Sbjct: 339 GTIPIVQAVPQGAETPRPL 357
>AB058765-1|BAB47491.2| 1070|Homo sapiens KIAA1862 protein protein.
Length = 1070
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 185 RVRSLR*YLRGTIPPASSLPRGAPPPRPIGWYC 87
R L+ RGT A LP APP P G +C
Sbjct: 936 RAGDLQGLSRGTARRARPLPPDAPPAEPPGLHC 968
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,129,710
Number of Sequences: 237096
Number of extensions: 577261
Number of successful extensions: 3589
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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