Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L19
         (243 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   6.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   6.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   8.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   8.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 144 FYFLAPPWQHGLPPDGFPS 88
           F  L   W   +PP G P+
Sbjct: 323 FKKLVDNWMTYMPPSGIPN 341


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 91  WETIRRQA 114
           WE IRRQA
Sbjct: 22  WEEIRRQA 29


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 144 FYFLAPPWQHGLPPDGFPS 88
           F  L   W   +PP G P+
Sbjct: 323 FKKLIDNWMTYMPPSGIPN 341


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +2

Query: 83  LCDGKP 100
           LCDGKP
Sbjct: 492 LCDGKP 497


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,457
Number of Sequences: 438
Number of extensions: 459
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)