Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L18
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 173 3e-44
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 172 4e-44
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 171 9e-44
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 171 9e-44
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 171 9e-44
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 171 1e-43
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 109 6e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 109 6e-25
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 91 1e-19
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 85 1e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 85 1e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 85 1e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 85 1e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 85 1e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 83 6e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 83 6e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 81 1e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 81 1e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 81 1e-16
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 81 1e-16
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 81 1e-16
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 81 2e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 73 3e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 73 3e-14
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 66 7e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 66 7e-12
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 0.96
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 0.96
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 27 2.9
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 25 8.9
U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical pr... 25 8.9
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 25 8.9
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 173 bits (420), Expect = 3e-44
Identities = 79/103 (76%), Positives = 83/103 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAE CDCLQGFQ KIREEYPDRIM+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 172 bits (419), Expect = 4e-44
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAE CDCLQGFQ KIREEYPDRIM+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 171 bits (416), Expect = 9e-44
Identities = 79/102 (77%), Positives = 82/102 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 316
EAESCDCLQGFQ KIREEYPDRIM
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 171 bits (416), Expect = 9e-44
Identities = 79/103 (76%), Positives = 83/103 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAES DCLQGFQ KIREEYPDRIMN
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 165
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 171 bits (416), Expect = 9e-44
Identities = 79/103 (76%), Positives = 83/103 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAES DCLQGFQ KIREEYPDRIMN
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 165
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 171 bits (415), Expect = 1e-43
Identities = 77/103 (74%), Positives = 83/103 (80%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAE CDCLQGFQ KIREE+PDRIM+
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMS 165
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (261), Expect = 6e-25
Identities = 48/103 (46%), Positives = 70/103 (67%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
AILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAE+ D L+GFQ K+REEY D+ ++
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLS 165
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (261), Expect = 6e-25
Identities = 48/103 (46%), Positives = 70/103 (67%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
AILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 191 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 319
EAE+ D L+GFQ K+REEY D+ ++
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLS 165
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 91.5 bits (217), Expect = 1e-19
Identities = 38/71 (53%), Positives = 52/71 (73%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
AI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Query: 191 EAESCDCLQGF 223
+ E+C+ LQGF
Sbjct: 128 QTENCEGLQGF 138
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 84.6 bits (200), Expect = 1e-17
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 84.6 bits (200), Expect = 1e-17
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 84.6 bits (200), Expect = 1e-17
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
AI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR+
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
Query: 191 EAESCDCLQGF 223
E C LQGF
Sbjct: 125 LTERCQSLQGF 135
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 84.6 bits (200), Expect = 1e-17
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 84.6 bits (200), Expect = 1e-17
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 82.6 bits (195), Expect = 6e-17
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 82.6 bits (195), Expect = 6e-17
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 123 LADNCSGLQGF 133
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R+
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Query: 191 EAESCDCLQGF 223
A +C+ LQGF
Sbjct: 122 LANNCEGLQGF 132
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 124 LADNCTGLQGF 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
A++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 191 EAESCDCLQGF 223
A++C LQGF
Sbjct: 125 LADNCTGLQGF 135
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 80.6 bits (190), Expect = 2e-16
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 190
AI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
Query: 191 EAESCDCLQGF 223
E+C LQGF
Sbjct: 130 LVENCRGLQGF 140
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 73.3 bits (172), Expect = 3e-14
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +2
Query: 14 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 193
+ VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 72 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131
Query: 194 AESCDCLQGF 223
AE+C+ LQGF
Sbjct: 132 AENCNGLQGF 141
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 73.3 bits (172), Expect = 3e-14
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +2
Query: 14 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 193
+ VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 44 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 103
Query: 194 AESCDCLQGF 223
AE+C+ LQGF
Sbjct: 104 AENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 65.7 bits (153), Expect = 7e-12
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 181
A+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 182 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 316
+ +EAE+ + L G ++RE +P +++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVI 168
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 65.7 bits (153), Expect = 7e-12
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +2
Query: 11 AILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 181
A+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 182 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 316
+ +EAE+ + L G ++RE +P +++
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVI 168
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 0.96
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 207 SHDSASLRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 43
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 42 MVPGSRST 19
PG+ T
Sbjct: 354 EPPGNMKT 361
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 0.96
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = -2
Query: 222 NPCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 43
NP + S+S +T + T++T +PS ++Q P T ++ + + + + +
Sbjct: 390 NPTTTAQLSSSSKTLTSTQTTQGSPST---VSQTTPGVSSASTGMTTSQASLRSTQNSVT 446
Query: 42 MVPGSRSTRMAPS 4
PGS + P+
Sbjct: 447 STPGSFTVTSTPT 459
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 60 DPSDRSSAPTTSFSDSPAPVTTGLRDTTRK 149
DPS SS+ ++S S SP+ +T L T R+
Sbjct: 123 DPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 84 PTTSFSDSPAPVTTGLRDTTRKVL 155
PTTS S +PAP T + R+ L
Sbjct: 27 PTTSASQAPAPATQNVSSPARRNL 50
>U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical
protein C54D2.1 protein.
Length = 373
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 75 SSAPTTSFS--DSPAPVTTGLRDTT 143
+ APTT+FS +PAP TT + TT
Sbjct: 275 TEAPTTTFSTTTTPAPTTTFIIPTT 299
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 219 PCKQSHDSASLRTTSKTESTSSAPS 145
P +SHDSA + STS+ PS
Sbjct: 494 PSSESHDSAPVELAPLPPSTSAGPS 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,586,154
Number of Sequences: 27780
Number of extensions: 121202
Number of successful extensions: 523
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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