Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L16
(318 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 1.2
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 1.6
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 2.8
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 22 6.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 21 8.4
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 21 8.4
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 21 8.4
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 21 8.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 21 8.4
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 21 8.4
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 21 8.4
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 136 RAQPPAPMPKIRRHRC 89
RA PP P ++R +RC
Sbjct: 650 RAAPPTPRERVRCYRC 665
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 51 ISRRRYWSRSQF 16
+S+ RYWSR++F
Sbjct: 1041 VSKERYWSRNRF 1052
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 303 RIASLKCGNGSVIMEP 256
R+ +LKC NG I P
Sbjct: 1700 RVVTLKCANGKEIRRP 1715
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/28 (28%), Positives = 10/28 (35%)
Frame = -3
Query: 256 SIVETRWAASWRYAGVGRVVGAWQPVSW 173
SI+ A Y G +W P W
Sbjct: 2691 SIIVAVLAVGGAYVGASAANNSWNPAKW 2718
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 4 RGRPELTPGPVPT 42
+ RPE P P PT
Sbjct: 311 KDRPEAAPAPAPT 323
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 70 GVLRQYYNDDAESWAWVRAAVRGGCL 147
G L QY + W+ + GGCL
Sbjct: 544 GPLGQYIEVRNKKWSGIVETALGGCL 569
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 191 LAAGLLGSVPSRQTSRQPPRTAARTHAQDSASSL 90
LA+G++ SVP+ S + + A+D + +
Sbjct: 74 LASGVMSSVPAAGASSSSSSSLLSSSAEDDVARI 107
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 191 LAAGLLGSVPSRQTSRQPPRTAARTHAQDSASSL 90
LA+G++ SVP+ S + + A+D + +
Sbjct: 74 LASGVMSSVPAAGASSSSSSSLLSSSAEDDVARI 107
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 77 KTPDILKSGSAGVGTGPG 24
K DI+ SGS G G G G
Sbjct: 1703 KDVDIIVSGSGGGGGGGG 1720
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 223 RYAGVGRVVGAWQPVSWAACRHARRAGSRRAQPPAPMPKIR 101
R A + R + S A R +R R +PP+P P R
Sbjct: 1036 RRAEIRRARNDRRNASRRAARARQRELQRAGRPPSPPPSPR 1076
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 163 RHARRAGSRRAQPPAPMPKIRR 98
R +RAG + PP+P RR
Sbjct: 1060 RELQRAGRPPSPPPSPRTAARR 1081
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
Frame = -3
Query: 157 ARRAGSRRAQ-----PPAPMPKIRRHR 92
ARRA +++ Q PP P P+ R R
Sbjct: 1065 ARRAATQQRQAERLPPPPPSPRTERRR 1091
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,028
Number of Sequences: 2352
Number of extensions: 7070
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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