Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L16
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 28 1.3
AC084196-5|AAK29948.2| 199|Caenorhabditis elegans Hypothetical ... 28 1.3
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 2.2
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 2.2
Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 27 2.9
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 27 2.9
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 27 2.9
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 27 2.9
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 2.9
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 27 2.9
AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical... 27 2.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 26 5.1
U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical pr... 26 5.1
AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA s... 26 5.1
Z95559-13|CAB09003.2| 682|Caenorhabditis elegans Hypothetical p... 26 6.8
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 26 6.8
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 25 8.9
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 25 8.9
Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical p... 25 8.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 25 8.9
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = -3
Query: 316 SRIPPHCKSEMWQRQCHHGA-----SIVETRW 236
+R+ CK WQR C HG VE RW
Sbjct: 429 NRLSKECKRRKWQRDCVHGQLWKCYYTVEDRW 460
>AC084196-5|AAK29948.2| 199|Caenorhabditis elegans Hypothetical
protein Y55D5A.4 protein.
Length = 199
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -3
Query: 295 KSEMWQRQCHHGASIVETRWAASWRYAGVGRVVGAWQPVSWAACRHARRAGS 140
+ E+ ++C GA + ET + W ++ G GA+ P + C + G+
Sbjct: 34 QKELEAQECPSGAGMSET-FVWDWPFSSDGTAPGAYTPEKFLVCLPFNKGGT 84
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 110 GHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRFNYRGSMMTLPLP 283
GH C R+C+ +G +C T C ++CP Y+G++ P P
Sbjct: 746 GHHCKRMCSPGLFGAGCAMKCSCPAGIRCDPVTGDCT--KKCPA--GYQGNLCDQPCP 799
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 110 GHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRFNYRGSMMTLPLP 283
GH C R+C+ +G +C T C ++CP Y+G++ P P
Sbjct: 746 GHHCKRMCSPGLFGAGCAMKCSCPAGIRCDPVTGDCT--KKCPA--GYQGNLCDQPCP 799
>Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 83 SITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVP 223
S T+T G ++ +AA C + V P + + YAT+ VP
Sbjct: 541 STATLTRGTSAGIPQVISAATCDAFVKIAVPDEAVGCVRYATFPGVP 587
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 13 PELTPGPVPTPADPDFRISG 72
PE+ P P P PA P+ SG
Sbjct: 532 PEVAPAPAPAPAAPESDASG 551
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 104 NLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRFNYRGS 262
+LG C + C GVT G + T P + PT+ ++ GS
Sbjct: 417 SLGKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADFIGS 469
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 119 CGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRF 247
CGR C SGVT C ++ PG C+ +C F
Sbjct: 207 CGRSCPNNQVYSGVTGECLPEKQPGQ-----DCIYSSQCQASF 244
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 119 CGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRF 247
CGR C SGVT C ++ PG C+ +C F
Sbjct: 207 CGRSCPNNQVYSGVTGECLPEKQPGQ-----DCIYSSQCQASF 244
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 RLCAAAACSSGVTA-RCPGDRLPGSHYATYTCVPPRRCPTR 244
R A CS G +C G+H+ TY C RC R
Sbjct: 475 RCNGVAECSDGSDEHKCSCQECLGTHHDTYMCSESNRCLKR 515
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 104 NLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPRRCPTRFNYRGS 262
+LG C + C GVT G + T P + PT+ ++ GS
Sbjct: 417 SLGKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADFIGS 469
>AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 83 SITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVP 223
S T+T G ++ +AA C + V P + + YAT+ VP
Sbjct: 541 STATLTRGTSAGIPQVISAATCDAFVKIAVPDEAVGCVRYATFPGVP 587
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -2
Query: 167 VPSRQTSRQPPRTAARTHAQDSASSL*YCRKTPDILKSGSAGVGTGPGVSSGRP 6
VP S PP T Q +A S + P SG A + GPG+ P
Sbjct: 217 VPQAPNSFIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFP 270
>Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical
protein ZK524.3b protein.
Length = 828
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 304 PHCKSEMWQRQCHHGASIVETRW 236
PH SEMW + G+ + + +W
Sbjct: 683 PHVASEMWSALANDGSLVSDQKW 705
>Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical
protein ZK524.3a protein.
Length = 859
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 304 PHCKSEMWQRQCHHGASIVETRW 236
PH SEMW + G+ + + +W
Sbjct: 714 PHVASEMWSALANDGSLVSDQKW 736
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical protein
R134.2 protein.
Length = 1118
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 262 GASIVETRWAASWRYAGVGRVVGAWQPVSWAA-CRHARRAGSRRAQPPAPMPKIR 101
G ++ET W GR+ +P + C+ + A R PPAP P+IR
Sbjct: 1040 GKGVMETFWVH-------GRIDDIAEPTELRSICKPSTVANERWITPPAPKPEIR 1087
>U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical
protein B0496.6 protein.
Length = 238
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +1
Query: 22 TPGPVPTPADP---DFRISGVLRQYYNDD 99
TP P+P P++P D +++ V+ +YY ++
Sbjct: 180 TPSPLPIPSEPKSSDIKVT-VIEEYYKEE 207
>AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA
synthetase (mitochondrial)protein.
Length = 828
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 304 PHCKSEMWQRQCHHGASIVETRW 236
PH SEMW + G+ + + +W
Sbjct: 683 PHVASEMWSALANDGSLVSDQKW 705
>Z95559-13|CAB09003.2| 682|Caenorhabditis elegans Hypothetical
protein Y41E3.1a protein.
Length = 682
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 176 GDRLPGSHYATYTCV 220
GDR+ GS YAT +C+
Sbjct: 163 GDRMNGSDYATISCI 177
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 175 WAACRHARRAGSRRAQPPAPMPKIRRHRCNT 83
W R A + R+A PP+P HR +T
Sbjct: 20 WIKVREAEQLARRQAPPPSPQQGPPIHRVST 50
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 159 TPDEQAAAAHSRPHPCPRFGV 97
T E AA+ + PH CP FG+
Sbjct: 17 TTVEYVAASPNPPHGCPNFGL 37
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 145 GSRRAQPPAPMPKIRRHRCNTVVKLL 68
GS +A P + PK + + NTV+K L
Sbjct: 220 GSNKASPTSEQPKWKSYVPNTVMKFL 245
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 116 GCGRLCAAAACSSGVTARCP 175
GC LC A +G T CP
Sbjct: 3592 GCSHLCLIGAGGNGYTCSCP 3611
>Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +2
Query: 80 DSITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPR 229
D ++PN C ++G DR+ S A C+ PR
Sbjct: 72 DLTDAVSPNESQACTSSLKGVVTAAGAAQMSVADRMTSSSVAPPLCIVPR 121
>Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +2
Query: 80 DSITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPR 229
D ++PN C ++G DR+ S A C+ PR
Sbjct: 54 DLTDAVSPNESQACTSSLKGVVTAAGAAQMSVADRMTSSSVAPPLCIVPR 103
>Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +2
Query: 80 DSITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPR 229
D ++PN C ++G DR+ S A C+ PR
Sbjct: 72 DLTDAVSPNESQACTSSLKGVVTAAGAAQMSVADRMTSSSVAPPLCIVPR 121
>Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +2
Query: 80 DSITTMTPNLGHGCGRLCAAAACSSGVTARCPGDRLPGSHYATYTCVPPR 229
D ++PN C ++G DR+ S A C+ PR
Sbjct: 54 DLTDAVSPNESQACTSSLKGVVTAAGAAQMSVADRMTSSSVAPPLCIVPR 103
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 116 GCGRLCAAAACSSGVTARCP 175
GC LC A +G T CP
Sbjct: 3592 GCSHLCLIGAGGNGYTCSCP 3611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,753,734
Number of Sequences: 27780
Number of extensions: 158582
Number of successful extensions: 650
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -