Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L16
(318 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 25 0.17
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 25 0.17
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.22
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 0.67
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 23 0.89
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 0.89
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 1.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 1.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 3.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 6.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 8.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 20 8.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 8.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 8.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 8.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 8.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 8.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 8.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 8.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 8.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 8.3
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.17
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 176 GDRLPGSHYATYTC 217
GDR G HY Y+C
Sbjct: 114 GDRASGKHYGVYSC 127
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.17
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 176 GDRLPGSHYATYTC 217
GDR G HY Y+C
Sbjct: 114 GDRASGKHYGVYSC 127
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 25.0 bits (52), Expect = 0.22
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 64 ISGVLRQYYNDDA 102
+ G+ RQ+YNDDA
Sbjct: 221 LKGIARQFYNDDA 233
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.4 bits (48), Expect = 0.67
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 223 RYAGVGRVVGAWQPVSWAACRHARRAGSRRAQPPAP 116
R + + R V W+ V + R RRA PP P
Sbjct: 221 RLSRLVRYVSQWEEVYIPLYQQPERHYERRATPPQP 256
Score = 19.8 bits (39), Expect = 8.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 147 QAAAAHSRPHPCPRF 103
Q AA H HPC F
Sbjct: 73 QKAAGHWVIHPCSSF 87
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 23.0 bits (47), Expect = 0.89
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 158 VTARCPGDRLPGSHYATYTC 217
V R GD+ G HY ++C
Sbjct: 7 VLCRVCGDKASGFHYGVHSC 26
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 0.89
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 158 VTARCPGDRLPGSHYATYTC 217
V R GD+ G HY ++C
Sbjct: 65 VLCRVCGDKASGFHYGVHSC 84
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 176 GDRLPGSHYATYTC 217
GDR G HY TC
Sbjct: 191 GDRASGYHYNALTC 204
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 61 RISGVLRQYYNDDAESWAWVRAAVRGG 141
R+SG+ +Q D + + VRA GG
Sbjct: 111 RVSGLTQQADQTDRDELSHVRALAAGG 137
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 3.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 197 HYATYTCVPPRRCPTRFN 250
HYA YT + P + F+
Sbjct: 772 HYALYTAMAPHATASEFD 789
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 6.3
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +2
Query: 215 CVPPRRCP 238
C P RRCP
Sbjct: 1695 CAPNRRCP 1702
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 149
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 300 IASLKCGNGSVIMEP 256
+ S K GNG ++EP
Sbjct: 93 VISNKIGNGGPLLEP 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 33 WSRSQFRAA 7
WSR +FRAA
Sbjct: 1140 WSRFEFRAA 1148
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 8.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 147 QAAAAHSRPHPCPRF 103
Q AA H HPC F
Sbjct: 73 QKAAGHWVIHPCSSF 87
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 307 PPHCKSEMWQRQ 272
P HCK E+ Q Q
Sbjct: 348 PLHCKPELGQSQ 359
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 365 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 397
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 350 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 382
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.3
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 192 PGSRSPGQRAVTPDE--QAAAAHSRPHPCPRFG 100
PGSR G P RP P PRFG
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPNPRFG 398
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 8.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 147 QAAAAHSRPHPCPRF 103
Q AA H HPC F
Sbjct: 73 QKAAGHWVIHPCSSF 87
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 287 NVATAVSSWSLD 252
NVAT V+S S+D
Sbjct: 732 NVATTVTSMSID 743
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,673
Number of Sequences: 438
Number of extensions: 1895
Number of successful extensions: 35
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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