Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L13
(157 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 1.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 1.8
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 2.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 20 3.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 3.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 3.2
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 19 5.6
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 7.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 7.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 7.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 7.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 18 9.8
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 116 KFSRDLLWTCPNTY 75
+F RDL+WT P Y
Sbjct: 91 QFVRDLIWT-PTVY 103
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 67 QWSYVFGHVHS 99
QWS V G VH+
Sbjct: 389 QWSRVLGRVHA 399
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 76 YVFGHVHSKSL 108
YVFGH +KSL
Sbjct: 502 YVFGHPLNKSL 512
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 19.8 bits (39), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 56 SYFGNGRMYLDTSIVSLY*T 115
+Y G+G+++ VSLY T
Sbjct: 2 NYKGSGKVHFGVDDVSLYGT 21
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 56 SYFGNGRMYLDTSIVSLY*T 115
+Y G+G+++ VSLY T
Sbjct: 2 NYKGSGKVHFGVDDVSLYGT 21
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 56 SYFGNGRMYLDTSIVSLY*T 115
+Y G+G+++ VSLY T
Sbjct: 2 NYKGSGKVHFGVDDVSLYGT 21
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 19.0 bits (37), Expect = 5.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -2
Query: 93 DVSKYIRPLPK*EARVRPLFSCMLPRTIPL 4
DVS P+PK E + S L PL
Sbjct: 76 DVSMTFGPVPKFEGEMAEKISNELNEMCPL 105
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 76 YVFGHVHSKSLLNLSCKQ 129
Y F H+K LL S K+
Sbjct: 795 YTFEQFHNKELLWTSVKK 812
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 76 YVFGHVHSKSLLNLSCKQ 129
Y F H+K LL S K+
Sbjct: 833 YTFEQFHNKELLWTSVKK 850
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.6 bits (36), Expect = 7.4
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 110 SRDLLWTCPN 81
SR +LW PN
Sbjct: 494 SRGMLWDLPN 503
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 18.6 bits (36), Expect = 7.4
Identities = 5/14 (35%), Positives = 7/14 (50%)
Frame = +1
Query: 25 HTTEQWPYARFLFW 66
H +W FL+W
Sbjct: 326 HEMSEWVKVVFLYW 339
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -3
Query: 104 DLLWTCPNTYDHCQNKKRAYGHCSVVCY 21
+L W N Y + +N Y S+ C+
Sbjct: 95 ELPWGSCNNYWNTKNCVNPYDRDSLSCW 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,818
Number of Sequences: 438
Number of extensions: 726
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used: 2655300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -