Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L10
(360 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 175 5e-44
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 175 5e-44
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 175 5e-44
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 114 9e-26
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 46 5e-05
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 46 5e-05
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 46 5e-05
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 46 5e-05
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 46 5e-05
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 46 5e-05
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 30 2.5
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 5.7
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 29 5.7
BC112177-1|AAI12178.1| 317|Homo sapiens hypothetical protein LO... 29 5.7
BC110859-1|AAI10860.1| 461|Homo sapiens SMTNL2 protein protein. 29 5.7
BC105050-1|AAI05051.1| 317|Homo sapiens smoothelin-like 2 protein. 29 5.7
AK124452-1|BAC85855.1| 317|Homo sapiens protein ( Homo sapiens ... 29 5.7
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 29 5.7
BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein. 28 7.6
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 175 bits (425), Expect = 5e-44
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = +3
Query: 57 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 236
KVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVG
Sbjct: 54 KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVG 113
Query: 237 DIPGVRFEVVKVGNVSLLALYKEEKERPRS 326
DIPGVRF+VVKV NVSLLALYK +KERPRS
Sbjct: 114 DIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 5 EANPFGGASHAKGIVLXK 58
+ANPFGGASHAKGIVL K
Sbjct: 37 KANPFGGASHAKGIVLEK 54
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 175 bits (425), Expect = 5e-44
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = +3
Query: 57 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 236
KVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVG
Sbjct: 54 KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVG 113
Query: 237 DIPGVRFEVVKVGNVSLLALYKEEKERPRS 326
DIPGVRF+VVKV NVSLLALYK +KERPRS
Sbjct: 114 DIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 5 EANPFGGASHAKGIVLXK 58
+ANPFGGASHAKGIVL K
Sbjct: 37 KANPFGGASHAKGIVLEK 54
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 175 bits (425), Expect = 5e-44
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = +3
Query: 57 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVG 236
KVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVG
Sbjct: 54 KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVG 113
Query: 237 DIPGVRFEVVKVGNVSLLALYKEEKERPRS 326
DIPGVRF+VVKV NVSLLALYK +KERPRS
Sbjct: 114 DIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 5 EANPFGGASHAKGIVLXK 58
+ANPFGGASHAKGIVL K
Sbjct: 37 KANPFGGASHAKGIVLEK 54
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 114 bits (274), Expect = 9e-26
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +3
Query: 147 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFEVVKVGNVSLLALYKEEKERPR 323
FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF+VVKV NVSLLALYK +KERPR
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPR 59
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 75 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 254
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 255 FEVVK 269
VV+
Sbjct: 123 LTVVR 127
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = -3
Query: 286 SDTFPTLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVT 137
S T P+ +SN TP SPT PL P AT TSS + +P R T AVT
Sbjct: 1233 SSTGPS-PSSNHTPA-SPTQTPLLP--ATLTSSKPTASSGEPPRPTTAVT 1278
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -3
Query: 280 TFPTLTTSNLTPGMSP---TAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTFLPFLMSCT 110
T PT+T+S TP SP TA P + AT ++ S + S GT +S T
Sbjct: 3102 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQT 3156
Query: 109 RTHLRMAEFGCLASTP-TFXEDDALSMRCTTEG 14
T +STP T L+ TT G
Sbjct: 3157 TTPTATMSTATPSSTPETVHTSTVLTTTATTTG 3189
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -3
Query: 280 TFPTLTTSNLTPGMSP---TAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTFLPFLMSCT 110
T PT+T+S TP SP TA P + AT ++ S + S GT +S T
Sbjct: 317 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQT 371
Query: 109 RTHLRMAEFGCLASTP-TFXEDDALSMRCTTEG 14
T +STP T L+ TT G
Sbjct: 372 TTPTATMSTATPSSTPETVHTSTVLTATATTTG 404
>BC112177-1|AAI12178.1| 317|Homo sapiens hypothetical protein
LOC342527 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = -3
Query: 352 HSPITM*TYDLGLSFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMW 173
H P+T T A T L P S P P+P+ SSF+ W
Sbjct: 50 HQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFT--W 107
Query: 172 LRQPSRGTNAVT 137
PS G AVT
Sbjct: 108 -SVPSSGYGAVT 118
>BC110859-1|AAI10860.1| 461|Homo sapiens SMTNL2 protein protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = -3
Query: 352 HSPITM*TYDLGLSFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMW 173
H P+T T A T L P S P P+P+ SSF+ W
Sbjct: 194 HQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFT--W 251
Query: 172 LRQPSRGTNAVT 137
PS G AVT
Sbjct: 252 -SVPSSGYGAVT 262
>BC105050-1|AAI05051.1| 317|Homo sapiens smoothelin-like 2 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = -3
Query: 352 HSPITM*TYDLGLSFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMW 173
H P+T T A T L P S P P+P+ SSF+ W
Sbjct: 50 HQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFT--W 107
Query: 172 LRQPSRGTNAVT 137
PS G AVT
Sbjct: 108 -SVPSSGYGAVT 118
>AK124452-1|BAC85855.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ42461 fis, clone BRACE2026836, moderately
similar to Mus musculus mRNA for smoothelin L1, large
isoform. ).
Length = 317
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = -3
Query: 352 HSPITM*TYDLGLSFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMW 173
H P+T T A T L P S P P+P+ SSF+ W
Sbjct: 50 HQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTPSPSEKNSSFT--W 107
Query: 172 LRQPSRGTNAVT 137
PS G AVT
Sbjct: 108 -SVPSSGYGAVT 118
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -3
Query: 280 TFPTLTTSNLTPGMSP---TAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTFLPFLMSCT 110
T PT+T+S TP SP TA P + AT ++ S + S GT +S T
Sbjct: 575 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQT 629
Query: 109 RTHLRMAEFGCLASTP-TFXEDDALSMRCTTEG 14
T +STP T L+ TT G
Sbjct: 630 TTPTATMSTATPSSTPETVHTSTVLTATATTTG 662
>BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein.
Length = 245
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 271 TLTTSNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGT-NAVTFLP 128
T SN PG P WP NP N S+ SS+ P T + V F P
Sbjct: 19 TSAVSNTKPGQPPQGWP-GSNPWNNPSAPSSVPSGLPPSATPSTVPFGP 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,297,252
Number of Sequences: 237096
Number of extensions: 1200127
Number of successful extensions: 2630
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2581
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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