Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L10
(360 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.12
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.16
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.16
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 1.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 1.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 1.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 1.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 1.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 1.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 1.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 1.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 1.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 1.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 1.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 1.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 2.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 3.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 3.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 4.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 4.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 4.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 4.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 4.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 4.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 4.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.9
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 20 7.7
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 20 7.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.2 bits (55), Expect = 0.12
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 222 GHAVGDIPGVRFEVVKVGNVSLLALYKEE-KERPRS*VYIVIGE*PA 359
G AVGD+PG+R +V+ GN+ E+ ++ + VY + PA
Sbjct: 42 GSAVGDVPGLR-QVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPA 87
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.8 bits (54), Expect = 0.16
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 222 GHAVGDIPGVRFEVVKVGNVSLL 290
GH V D+PGVR V++ G + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
Score = 23.4 bits (48), Expect = 0.83
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 331 TYDLGL-SFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPAT 200
TY L L S + + + S ++ T PG+ P A L PN T
Sbjct: 1470 TYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTT 1514
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.8 bits (54), Expect = 0.16
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 222 GHAVGDIPGVRFEVVKVGNVSLL 290
GH V D+PGVR V++ G + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
Score = 23.4 bits (48), Expect = 0.83
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 331 TYDLGL-SFSSLYRARSDTFPTLTTSNLTPGMSPTAWPLRPNPAT 200
TY L L S + + + S ++ T PG+ P A L PN T
Sbjct: 1466 TYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTT 1510
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIEKSGN 205
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 1.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKG 224
+N IEE+D VLV + G
Sbjct: 175 INKIEEHDTVLVVNIEKSG 193
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKG 224
+N IEE+D VLV + G
Sbjct: 186 INKIEEHDTVLVVNIEKSG 204
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 1.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKG 224
+N IEE+D VLV + G
Sbjct: 175 INKIEEHDTVLVVNIEKSG 193
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 2.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKG 224
+N IEE D VLV + G
Sbjct: 186 INKIEEQDTVLVVNIEKSG 204
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 2.5
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 81 PNSAIRKCV 107
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 257 KSDSRNVTNSVAFTTESRN*HLIV 186
KS RN+ ++ A TES+ +++V
Sbjct: 267 KSGKRNIIDNSAQKTESKTNNIVV 290
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 3.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 271 TLTTSNLTPGMSPTAWP 221
T+ SN+TP AWP
Sbjct: 905 TVARSNVTPRSPGRAWP 921
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 186 INKIKEHDTVLVVNIEKSGN 205
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 186 INKIKEHDTVLVVNIEKSGN 205
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 186 INKIKEHDTVLVVNIEKSGN 205
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 191 INKIKEHDTVLVVNIEKSGN 210
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 186 INKIKEHDTVLVVNIEKSGN 205
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 4.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 168 LNHIEENDEVLVAGFGRKGH 227
+N I+E+D VLV + G+
Sbjct: 186 INKIKEHDTVLVVNIEKSGN 205
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 4.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 207 PQLTPHRSPQ 178
PQ +PH+SPQ
Sbjct: 23 PQPSPHQSPQ 32
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -1
Query: 264 PPQI*LQECHQQRGLYDRIPQLTPHRSPQCG*G 166
PP I H++ L + + P S CG G
Sbjct: 58 PPSIDRSSIHEESYLAESSRSIDPCASKYCGIG 90
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6
variant 2 precursor protein.
Length = 94
Score = 20.2 bits (40), Expect = 7.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 74 GFNANFXRGRCP*HEMHHR 18
GF RG+CP +E+ R
Sbjct: 27 GFGGLGGRGKCPSNEIFSR 45
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6
variant 1 precursor protein.
Length = 92
Score = 20.2 bits (40), Expect = 7.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 74 GFNANFXRGRCP*HEMHHR 18
GF RG+CP +E+ R
Sbjct: 27 GFGGLGGRGKCPSNEIFSR 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,318
Number of Sequences: 438
Number of extensions: 1764
Number of successful extensions: 37
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8432340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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