SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L08
         (220 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q152R4 Cluster: SCP-related protein; n=1; Bombyx mori|R...    58   3e-08
UniRef50_UPI00015B4F63 Cluster: PREDICTED: similar to GA21107-PA...    38   0.033
UniRef50_UPI0000D55575 Cluster: PREDICTED: similar to Maltase-gl...    33   0.95 
UniRef50_A2DMC9 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q6MDA5 Cluster: Putative serine/threonine phosphoprotei...    31   6.7  

>UniRef50_Q152R4 Cluster: SCP-related protein; n=1; Bombyx mori|Rep:
           SCP-related protein - Bombyx mori (Silk moth)
          Length = 216

 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 24/52 (46%), Positives = 34/52 (65%)
 Frame = +1

Query: 64  LLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQVSGHPAAT 219
           L+ +  + C   +  + L  LSC  I+ FVNGHN RR+ +AKG++SG PAAT
Sbjct: 5   LIFVVALACFQSIDCRKLQPLSCDDIRQFVNGHNLRREQIAKGEISGQPAAT 56


>UniRef50_UPI00015B4F63 Cluster: PREDICTED: similar to GA21107-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA21107-PA - Nasonia vitripennis
          Length = 232

 Score = 38.3 bits (85), Expect = 0.033
 Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = +1

Query: 49  MAVRALLILAMVVCIGHVHSKSLLN--LSCKQIKDFVNGHNYRRQLLAKGQVSGHPAA 216
           + +  +++L    C+   + KS++   LSC+  ++ ++ HN  RQL+A GQV+G P+A
Sbjct: 8   LVLMMMMMLCATRCLA-CNGKSMMRTGLSCQDKRNILDEHNRLRQLVALGQVNGQPSA 64


>UniRef50_UPI0000D55575 Cluster: PREDICTED: similar to
           Maltase-glucoamylase, intestinal; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to
           Maltase-glucoamylase, intestinal - Tribolium castaneum
          Length = 845

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 102 DVSNTYDHCQNKKRAYGHCSVVCYHERYTKY 10
           D++ TYD+C N K  + + + +CYH   +KY
Sbjct: 81  DINATYDYCTNIKCCFDNATRLCYHYLPSKY 111


>UniRef50_A2DMC9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 291

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  LLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQVSGHP 210
           ++I+ ++VC+    SKS  + S K++K + N +N  + L    Q  G+P
Sbjct: 200 VIIVVIIVCLKKSKSKSSSSSSSKKVKTYKNDYNEAQALSDFPQGQGYP 248


>UniRef50_Q6MDA5 Cluster: Putative serine/threonine phosphoprotein
           phosphatase; n=1; Candidatus Protochlamydia amoebophila
           UWE25|Rep: Putative serine/threonine phosphoprotein
           phosphatase - Protochlamydia amoebophila (strain UWE25)
          Length = 259

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 85  VCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQVSGHPA 213
           V  GHV    +  L    +K     H+  R+L+  GQ+S H A
Sbjct: 121 VIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSEHQA 163


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,351,440
Number of Sequences: 1657284
Number of extensions: 3718291
Number of successful extensions: 9134
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9133
length of database: 575,637,011
effective HSP length: 51
effective length of database: 491,115,527
effective search space used: 10313426067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -