Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L07
         (108 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   2.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    18   8.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    18   8.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    18   8.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 92  SLYVLCDCRV 63
           SL +LCDC V
Sbjct: 269 SLIILCDCVV 278


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 89  LYVLCDC 69
           L+V CDC
Sbjct: 296 LFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 89  LYVLCDC 69
           L+V CDC
Sbjct: 296 LFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 89  LYVLCDC 69
           L+V CDC
Sbjct: 296 LFVFCDC 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,144
Number of Sequences: 336
Number of extensions: 89
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 16
effective length of database: 117,209
effective search space used:  2226971
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)