Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L06
         (149 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   2.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   2.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    19   3.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    19   4.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    18   7.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 62  FDLFSLKKICVCMKYNAFSFVFSS 133
           FDL S K   +  K   F  VFSS
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSS 97


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 62  FDLFSLKKICVCMKYNAFSFVFSS 133
           FDL S K   +  K   F  VFSS
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSS 97


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 117 LNALYFIHTQIFFKLKRSKLHRRETTIANIY 25
           LN  YFI  Q+F   +   LH + TT+  +Y
Sbjct: 294 LNNFYFIIFQVF---ESFYLH-KATTLETVY 320


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 63  KLHRRETTIANIYM*NSKPSC 1
           KL+  E    + Y  NSKP C
Sbjct: 77  KLYSSEGQQNSNYSSNSKPDC 97


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 97  TYTNFF*TEEIEIT*KGDD 41
           T  NF   +EIE+   G+D
Sbjct: 134 TGVNFMKLDEIEVKVTGND 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,494
Number of Sequences: 336
Number of extensions: 509
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 30
effective length of database: 112,505
effective search space used:  2137595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)