Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_L04
(418 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 9e-34
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 133 1e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 2e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 115 3e-25
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 109 2e-23
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 107 7e-23
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 100 2e-20
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 97 1e-19
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 88 8e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 85 6e-16
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 79 5e-14
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 75 4e-13
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 75 8e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 72 6e-12
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 70 2e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 65 6e-10
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 64 8e-10
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 5e-06
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 43 0.002
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 43 0.003
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 42 0.005
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 40 0.016
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 40 0.027
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 38 0.11
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 36 0.25
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 36 0.34
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 35 0.78
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 1.0
UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides im... 33 1.8
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 1.8
UniRef50_A0LF78 Cluster: Glycosyl transferase, family 39; n=1; S... 33 2.4
UniRef50_UPI00004A5BB5 Cluster: PREDICTED: similar to THAP domai... 31 7.2
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 31 7.2
UniRef50_A5AFT7 Cluster: Putative uncharacterized protein; n=2; ... 31 9.6
UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1; Aq... 31 9.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (348), Expect = 9e-34
Identities = 64/90 (71%), Positives = 79/90 (87%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KD++SQRK
Sbjct: 96 GRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRK 155
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELR 284
TCYA H+Q++ IR KM I+ RE+TS++L+
Sbjct: 156 TCYAQHSQIKNIRAKMTAIIKREITSTDLK 185
Score = 73.3 bits (172), Expect = 2e-12
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +1
Query: 289 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEIS 417
VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S
Sbjct: 187 VVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLS 229
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 133 bits (322), Expect = 1e-30
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K RK
Sbjct: 93 GKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 152
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T YA H QVR IRKKM EI+TREV +++L+E
Sbjct: 153 TSYAQHQQVRQIRKKMMEIMTREVQTNDLKE 183
Score = 74.1 bits (174), Expect = 1e-12
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +1
Query: 226 QSGKKCVKSSRAK*PVQSFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 405
Q KK ++ + +VVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPK 222
Query: 406 FEI 414
FE+
Sbjct: 223 FEL 225
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (304), Expect = 2e-28
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
GRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +K
Sbjct: 488 GRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKK 547
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
TCYA +Q+R IR+KM EI+T TS +L+E
Sbjct: 548 TCYAQSSQIRQIRRKMREIMTNMATSCDLKE 578
Score = 56.8 bits (131), Expect = 2e-07
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +1
Query: 286 KVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
++V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++
Sbjct: 578 ELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDL 620
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 115 bits (277), Expect = 3e-25
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++K
Sbjct: 92 GRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKK 151
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELR 284
T YA ++V+AIRKKM +I+T V+S++L+
Sbjct: 152 TSYAKTSRVKAIRKKMVDILTETVSSNDLK 181
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 313 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 411
++A+ I I+P+ +V IRKVKVLK P+ +
Sbjct: 205 TLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVD 237
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 109 bits (262), Expect = 2e-23
Identities = 49/91 (53%), Positives = 68/91 (74%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +K
Sbjct: 93 GKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKK 152
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T YA +Q+RAIR+KM EI+ RE ++ L++
Sbjct: 153 TTYAASSQIRAIRRKMTEIIQREASTCTLQQ 183
Score = 59.3 bits (137), Expect = 3e-08
Identities = 25/43 (58%), Positives = 37/43 (86%)
Frame = +1
Query: 286 KVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++
Sbjct: 183 QLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDL 225
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 107 bits (258), Expect = 7e-23
Identities = 48/91 (52%), Positives = 68/91 (74%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ + +K
Sbjct: 95 GKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKK 154
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T YA Q++ IRK M ++T+E S EL +
Sbjct: 155 TSYAKSAQIKKIRKIMNNLITKEAASRELTQ 185
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 99.5 bits (237), Expect = 2e-20
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
GR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+
Sbjct: 19 GRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKS 77
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELR 284
YA T+++ +R ++ E+V REV +L+
Sbjct: 78 HAYAQTTRIKKLRAEIVEVVQREVARCDLK 107
Score = 48.0 bits (109), Expect = 8e-05
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1
Query: 289 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
VV KLIPDSI +D I+PL +RKVKVLK+P+ ++
Sbjct: 109 VVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDL 150
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 97.1 bits (231), Expect = 1e-19
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTL---S 185
GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K + S
Sbjct: 96 GRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQS 155
Query: 186 QRKTCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
TCYA +QVRAIR+K+ +T E + E
Sbjct: 156 STSTCYAKSSQVRAIRRKINTFITNEAAKLGIAE 189
Score = 43.2 bits (97), Expect = 0.002
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 244 VKSSRAK*PVQSFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 411
+ + AK + F K LI + K IEK I+PL+++ IRKVKVLKRP+ +
Sbjct: 178 ITNEAAKLGIAEFSK---NLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLD 230
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 87.8 bits (208), Expect = 8e-17
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRK
Sbjct: 92 GTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRK 151
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T YA +Q++ IRKK+ EIV +EV+ + +
Sbjct: 152 TTYAQRSQIKDIRKKIVEIVLKEVSKKSITQ 182
Score = 41.9 bits (94), Expect = 0.005
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +1
Query: 235 KKCVKSSRAK*PVQSFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 411
KK V+ + +S +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ +
Sbjct: 165 KKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 85.0 bits (201), Expect = 6e-16
Identities = 33/91 (36%), Positives = 59/91 (64%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
GRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT Q +
Sbjct: 96 GRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSR 155
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
CYA V+ +R ++ +++ R ++ +++E
Sbjct: 156 NCYAKQRLVKWLRMRITKMIKRRLSKVQIKE 186
Score = 34.3 bits (75), Expect = 1.0
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +1
Query: 286 KVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 411
+ V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+
Sbjct: 186 EAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFD 227
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 78.6 bits (185), Expect = 5e-14
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 36 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAFHT 215
F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY H+
Sbjct: 52 FDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHS 111
Query: 216 QVRAIRKKMCEIVTREVTSSELRE 287
+ IRK M +++ E++ ++++
Sbjct: 112 DEKKIRKIMFDVIEEELSGCDVQK 135
Score = 37.9 bits (84), Expect = 0.083
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 286 KVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 396
K++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 135 KIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 75.4 bits (177), Expect = 4e-13
Identities = 32/84 (38%), Positives = 55/84 (65%)
Frame = +3
Query: 36 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAFHT 215
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 216 QVRAIRKKMCEIVTREVTSSELRE 287
Q RA+R+++ +I+ +E + ++++
Sbjct: 156 QKRALRRRITDIIIKEGINMDIKD 179
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 74.5 bits (175), Expect = 8e-13
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +1
Query: 220 SAQSGKKCVKSSRAK*PVQSFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 399
++Q KK ++ + +VVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+
Sbjct: 108 TSQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKK 167
Query: 400 PRFEI 414
P+FE+
Sbjct: 168 PKFEL 172
Score = 36.3 bits (80), Expect = 0.25
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 131
G+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 90 GKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 71.7 bits (168), Expect = 6e-12
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 3 SARGGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTL 182
S G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K
Sbjct: 85 SIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLAN 144
Query: 183 SQRKTCYAFHTQVRAIRKKMCEIVT 257
S + YA + R +R M + +T
Sbjct: 145 SHKNHTYANSHKARQVRDVMIKALT 169
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1
Query: 295 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 40
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 64.9 bits (151), Expect = 6e-10
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +3
Query: 27 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYA 206
L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 97 LTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHV 156
Query: 207 FHTQVRAIRKKMCEIVTREV 266
+R +R + E + E+
Sbjct: 157 KGRVIRMMRAGIYETLHNEL 176
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 289 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 405
+V KL + + +A I RDV IR+VKV+KRPR
Sbjct: 184 LVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPR 222
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 64.5 bits (150), Expect = 8e-10
Identities = 24/43 (55%), Positives = 37/43 (86%)
Frame = +1
Query: 286 KVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
+V+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++
Sbjct: 166 EVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDL 208
Score = 61.7 bits (143), Expect = 6e-09
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDTLSQR 191
G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+ TN T R
Sbjct: 78 GKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYAR 136
Query: 192 KTCYAFHTQVRAI 230
+ A + QV I
Sbjct: 137 QLVCAQYQQVHQI 149
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.0 bits (119), Expect = 5e-06
Identities = 31/87 (35%), Positives = 52/87 (59%)
Frame = +3
Query: 42 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAFHTQV 221
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K S +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARS---------SQM 134
Query: 222 RAIRKKMCEIVTREVTSSELREGREQA 302
+AIR+ M +IV + + ++ ++A
Sbjct: 135 QAIREMMVDIVKKRASETDFETFMQEA 161
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 43.2 bits (97), Expect = 0.002
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S K
Sbjct: 79 GTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIK 138
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T IRKK+ E +T + + E
Sbjct: 139 T---------EIRKKIQEYLTEKARAMTFSE 160
Score = 31.9 bits (69), Expect = 5.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 235 KKCVKSSRAK*PVQSFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 414
KK + K +F + V +I D +++ K IYP+R + IRK +VL P +I
Sbjct: 143 KKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKI 202
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.7 bits (96), Expect = 0.003
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G F G L D +R +V++ + I+ IDV T DGY +RV + FT + + K
Sbjct: 68 GTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTR----RAK 123
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
T +Q RAIRK+M +++ + E
Sbjct: 124 T-----SQQRAIRKEMFKVIEENAKECDFDE 149
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 310 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 402
+SI + I++A IYP+R IRK +VL+ P
Sbjct: 161 ESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.9 bits (94), Expect = 0.005
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 12 GGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQR 191
GG + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K +
Sbjct: 73 GGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK----RA 128
Query: 192 KTCYAFHTQVRAIRKKMCEIVTR 260
+T +Q+ +IR+ M +V +
Sbjct: 129 RT-----SQIESIRQIMINVVNK 146
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 40.3 bits (90), Expect = 0.016
Identities = 30/91 (32%), Positives = 43/91 (47%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G F G +L D +R + ++ + + +V T DGY LRV + FT R+
Sbjct: 72 GDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQ 124
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTSSELRE 287
C +Q AIRK M EIV ++ S L E
Sbjct: 125 RCKT--SQKSAIRKVMQEIVEQKARESTLDE 153
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 39.5 bits (88), Expect = 0.027
Identities = 30/86 (34%), Positives = 44/86 (51%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G N F +LT + L + ++ + IE +DV T DGY LRV + F T+ + K
Sbjct: 78 GDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVF----TVRRCK 133
Query: 195 TCYAFHTQVRAIRKKMCEIVTREVTS 272
T +Q RAIR M +IV + +S
Sbjct: 134 T-----SQKRAIRAIMRQIVVEKASS 154
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 277 SFVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 402
+FV+ + + + + +I K IYP+R V IRK+++L P
Sbjct: 156 NFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.5 bits (83), Expect = 0.11
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 12 GGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 173
G F +LT D LR +V++ + +EA+I V TTD Y +RV + T K
Sbjct: 71 GSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTK 124
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 36.3 bits (80), Expect = 0.25
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV + T K
Sbjct: 81 GNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHK 140
Query: 195 T 197
T
Sbjct: 141 T 141
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 35.9 bits (79), Expect = 0.34
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 167
G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 80 GERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 34.7 bits (76), Expect = 0.78
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 15 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 173
G++ L F G T+ +R +++++ I+ IDV T DGY++R+ + T K
Sbjct: 86 GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +3
Query: 48 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAFHTQVRA 227
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 228 IRKKMCEIV 254
IR+ M ++V
Sbjct: 134 IRRTMIDLV 142
>UniRef50_Q1DMF8 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 628
Score = 33.5 bits (73), Expect = 1.8
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 154 QKTRRTYPSVVL--TSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRP 14
QK RRTYP + T + +IS H + + R +PW+L TLRP
Sbjct: 505 QKERRTYPVQISLDTRQIPNISTRHIVSFVHWDAENRRVPWRLAETLRP 553
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.5 bits (73), Expect = 1.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 36 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRK 194
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A0LF78 Cluster: Glycosyl transferase, family 39; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Glycosyl
transferase, family 39 - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 570
Score = 33.1 bits (72), Expect = 2.4
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = -3
Query: 239 FFPDCADLGMKSVACLALAERILVGETDAENT*DISVSGLNVNVGF--NQCLPFL--YHP 72
F P+ G+ +VA +ALA R L GE ++ I + G V GF ++ LP + + P
Sbjct: 386 FLPEALLPGLAAVAAVALAIRSLAGERPVKSA-IIMIVGSTVIFGFALHRILPEVRGFWP 444
Query: 71 SEFISGEVHAVEIAENITSP 12
+ + VHA+E A P
Sbjct: 445 TTTVVDAVHALERARGTRIP 464
>UniRef50_UPI00004A5BB5 Cluster: PREDICTED: similar to THAP domain
protein 1 isoform 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to THAP domain protein 1 isoform 1 -
Canis familiaris
Length = 178
Score = 31.5 bits (68), Expect = 7.2
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 120 KTTDGYVLRVFCI-GFTNKDTLSQRKTCYAFHTQVRAIRKKM 242
KT D L VFC +T +DT+ QRK + QV +RKK+
Sbjct: 89 KTPDN--LSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKL 128
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 31.5 bits (68), Expect = 7.2
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 280 FVKVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 405
F +V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_A5AFT7 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 277
Score = 31.1 bits (67), Expect = 9.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 176 ILVGETDAENT*DISVSGLNVNVGF 102
+LVGE+D N +I V+GL VN+G+
Sbjct: 1 MLVGESDTSNEGEICVNGLCVNIGY 25
>UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1;
Aquifex aeolicus|Rep: Uncharacterized protein aq_555 -
Aquifex aeolicus
Length = 267
Score = 31.1 bits (67), Expect = 9.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 18 RNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 110
R V+ H + T ++W K+W+ L+EAN
Sbjct: 154 RKVVVESHALGKKTTLIQWYTKEWKELVEAN 184
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,483,692
Number of Sequences: 1657284
Number of extensions: 7980736
Number of successful extensions: 20321
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20314
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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