Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_L02
         (152 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.                   55   4e-08
BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.        55   4e-08
BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.        55   4e-08
BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08
BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.        55   4e-08
AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13 p...    55   4e-08

>X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


>AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNR 112
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKAR 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,226,550
Number of Sequences: 237096
Number of extensions: 260021
Number of successful extensions: 3819
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3819
length of database: 76,859,062
effective HSP length: 30
effective length of database: 69,746,182
effective search space used: 1394923640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)