Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K24
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical pr... 75 2e-14
AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical... 27 2.9
Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical pr... 27 3.9
AL132848-3|CAB60386.1| 327|Caenorhabditis elegans Hypothetical ... 27 3.9
AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine re... 27 3.9
Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 27 5.1
U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical pr... 26 8.9
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 26 8.9
>U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical
protein T26A5.4 protein.
Length = 487
Score = 74.5 bits (175), Expect = 2e-14
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Frame = +1
Query: 22 HALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPL-DYNKG-PQLLQYVAKTIWQ 195
HA LA+ GF V +I + ++ P +I +P I+I + P D+ P +Q K W
Sbjct: 32 HAKMLADEGFDVKLIGFFDSIPGEQIMNHPRIKIVGIPPPPDFMDSLPAFVQLPLKLFWN 91
Query: 196 SISLLLTLFISGKCHYL---LCQNPPAIPTLPICSVYCLVARVQLIIDWHNYGYSL 354
I+L L L L L QNPPA+PT+ +C ++ + + IDWHNY YS+
Sbjct: 92 FITLFLALAFQTSAFNLRIILMQNPPALPTMIVCFMFSIFKFAKFSIDWHNYMYSI 147
>AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical
protein C13A2.1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 58 NIITYVETTPLTEITENPNIQISKLHPLDYN 150
N+IT+++T +I E+PN + + PL YN
Sbjct: 320 NVITHIKTVDWVDIIEDPN-EKQVVEPLYYN 349
>Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical
protein K05C4.9 protein.
Length = 724
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 115 IQISKLHPLDYNKGPQLLQYVAKTIWQSISLLLTLFIS 228
+ ++ +H D+ G QY+ +IW +I L+TL +S
Sbjct: 418 VLLNFIHNFDH-LGSNFTQYLRNSIWSAIQTLVTLDLS 454
>AL132848-3|CAB60386.1| 327|Caenorhabditis elegans Hypothetical
protein Y47H10A.4 protein.
Length = 327
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 75 GNYTAHRNNRKPQYSNFKTASIRLQQRPSITSIC 176
G Y+ N P YS +K ++ + PS+ + C
Sbjct: 221 GQYSTQTTNNYPPYSLYKVEELKRDRIPSMAARC 254
>AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein33 protein.
Length = 334
Score = 27.1 bits (57), Expect = 3.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 292 HCIWVMLEWLVGS 254
HC W+ EWL GS
Sbjct: 55 HCFWITCEWLSGS 67
>Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical
protein M01E5.3b protein.
Length = 556
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 60 HYYLCGNYTAHRNNRKPQYSNFKTASIRLQQR 155
HY N AH+ R+P ++NF A + QR
Sbjct: 426 HYRRHMNAQAHQQQREPSWNNFANAPPAIIQR 457
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +1
Query: 67 TYVETTPLTEITEN--PNIQISKLHPLDYNKGPQLLQYVAKTIWQSISLLLTLFISGKCH 240
TY+ T P + EN N + ++ + +N + K +W +T +S
Sbjct: 560 TYINTIPSMTLIENNLTNFSFNNINSM-FNCELPTIPASPKLLWPFSRKSITCNLSDCVL 618
Query: 241 YLLCQNPPAIPTLPICSVYC 300
P A L +CS+YC
Sbjct: 619 LTFVCIPSAFANLLLCSLYC 638
>U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical
protein C56C10.6 protein.
Length = 422
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 189 MAKHKFAFNLIYKWKMPLFAV-SEPTSHSNIT 281
M+K KFA+N + W+MP+ S+ T ++T
Sbjct: 294 MSKGKFAWNDPFDWEMPISTTPSKSTPSKSVT 325
>Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical
protein T04F3.3 protein.
Length = 562
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 90 HRNNRKPQYSNFKTASIRLQQRPSITSICSENYMAKHKFAFNLI 221
H+N+ P + F ++++RPSI SE+ ++ + FNLI
Sbjct: 403 HQNSHGPMFPEFSQLQSQMRRRPSI----SESGISLNGPRFNLI 442
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/55 (20%), Positives = 26/55 (47%)
Frame = +3
Query: 114 YSNFKTASIRLQQRPSITSICSENYMAKHKFAFNLIYKWKMPLFAVSEPTSHSNI 278
Y ++ S Q+P + E+ ++ H N+ Y MP+ +S+ ++ ++
Sbjct: 426 YGGYEDVSNNQFQQPDYPPLSVESQVSCHSQESNITYHSSMPVTPISQQANNGSL 480
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,635,613
Number of Sequences: 27780
Number of extensions: 173819
Number of successful extensions: 465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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