Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K23
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 93 2e-19
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 93 2e-19
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 93 2e-19
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 93 2e-19
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 93 2e-19
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 93 2e-19
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 93 2e-19
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 93 2e-19
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 93 2e-19
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 92 3e-19
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 92 3e-19
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 92 3e-19
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 92 3e-19
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 92 3e-19
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 92 3e-19
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 92 3e-19
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 92 3e-19
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 92 3e-19
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 91 7e-19
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 91 7e-19
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 91 7e-19
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 91 7e-19
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 87 1e-17
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 36 0.036
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 36 0.036
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 36 0.036
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 36 0.036
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 36 0.036
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 36 0.036
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 36 0.036
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 36 0.036
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 36 0.036
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 34 0.083
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 34 0.083
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 34 0.083
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 34 0.083
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 31 0.77
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 1.0
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 1.0
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 1.0
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 1.0
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 102
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 100
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 143
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 103
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 205
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 135
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSV
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV 68
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSV
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSV 138
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSV
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSV 138
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 91.1 bits (216), Expect = 7e-19
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSL 135
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSV
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSV 138
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3
Query: 171 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSV 320
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSV
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSV 99
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 284
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 284
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 284
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 284
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 189 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 284
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 261 VFVHQTAIIRNNPRKAVRSV 320
+F +QTAI RNNPRK +RSV
Sbjct: 23 LFPNQTAIKRNNPRKFLRSV 42
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 284
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 284
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 284
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 284
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,133,717
Number of Sequences: 237096
Number of extensions: 491183
Number of successful extensions: 1047
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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