Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_K21
         (367 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    25   0.89 
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    22   8.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   8.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   8.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   8.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   8.3  

>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 156 LYCCMSARNTRENTIGMSRPSATGSTEYSSN*SRRFSAGDARTISYR--TSTCSRGNRRL 329
           L CC S  +TR++     R   T   E+ S+    F++G    + Y    +   R N RL
Sbjct: 24  LNCCRSLISTRQHGFFPRRSVTTNLVEFVSHCHAAFASGAQMDVIYTDLKAAFDRVNHRL 83


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 207 SSQSCSRGCFSHSY 166
           SS+ CS+ C S +Y
Sbjct: 177 SSECCSKSCLSFAY 190


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 59  PAGGDSQPQRN*APSTRPR 3
           PAGG +QP ++ A   +P+
Sbjct: 395 PAGGQAQPSQSAAQQYQPQ 413


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 71  AGSRPAGGDSQPQRN*AP 18
           AGS P G DS P ++  P
Sbjct: 364 AGSVPGGSDSAPPKSNPP 381


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 71  AGSRPAGGDSQPQRN*AP 18
           AGS P G DS P ++  P
Sbjct: 364 AGSVPGGSDSAPPKSNPP 381


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 242  LQLISSLQCRRCP 280
            +QL SS  C RCP
Sbjct: 1008 MQLTSSPDCTRCP 1020


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,695
Number of Sequences: 2352
Number of extensions: 8139
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)