Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_K21
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical pr... 146 6e-36
U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein ... 146 6e-36
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 29 1.0
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 27 4.1
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 27 4.1
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 27 4.1
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 27 5.4
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 5.4
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 26 7.2
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z68341-2|CAA92765.2| 649|Caenorhabditis elegans Hypothetical pr... 26 7.2
U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain in... 26 9.5
U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain in... 26 9.5
U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain int... 26 9.5
>Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical
protein F35G12.6 protein.
Length = 364
Score = 146 bits (353), Expect = 6e-36
Identities = 66/115 (57%), Positives = 84/115 (73%)
Frame = +2
Query: 5 EASCWVLSFFEAENRLLQGGCRRKCLSILKTIRDRHLDLPGNPVTCYHMKTLLLYECEKH 184
EA W + AEN LL GG RRK LSILK +RD H+D PG PVT Y +KTL+LYECEKH
Sbjct: 232 EADAWAMKMHGAENMLLTGG-RRKTLSILKCLRDAHMDFPGTPVTNYILKTLVLYECEKH 290
Query: 185 PREHDWDEPAIGDRINGIFLQLISSLQCRRCPHYFLPHVDLFKGKSPTAL*NAAK 349
E++W++P IGDR+ GI LQL+S LQCRRC HYFLP +DL + K ++ ++A+
Sbjct: 291 CSEYEWEDPNIGDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSKPVHSIEHSAQ 345
>U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein
protein.
Length = 364
Score = 146 bits (353), Expect = 6e-36
Identities = 66/115 (57%), Positives = 84/115 (73%)
Frame = +2
Query: 5 EASCWVLSFFEAENRLLQGGCRRKCLSILKTIRDRHLDLPGNPVTCYHMKTLLLYECEKH 184
EA W + AEN LL GG RRK LSILK +RD H+D PG PVT Y +KTL+LYECEKH
Sbjct: 232 EADAWAMKMHGAENMLLTGG-RRKTLSILKCLRDAHMDFPGTPVTNYILKTLVLYECEKH 290
Query: 185 PREHDWDEPAIGDRINGIFLQLISSLQCRRCPHYFLPHVDLFKGKSPTAL*NAAK 349
E++W++P IGDR+ GI LQL+S LQCRRC HYFLP +DL + K ++ ++A+
Sbjct: 291 CSEYEWEDPNIGDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSKPVHSIEHSAQ 345
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 29.1 bits (62), Expect = 1.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 245 QLISSLQCRRCPHYFLPHV 301
QL+S ++C + P+Y PHV
Sbjct: 855 QLLSGMECNKIPYYLRPHV 873
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 221 RRWPAHPNRVLAGVSRTHTTVKFSCDN 141
R+W +P+R + RT+T VKF D+
Sbjct: 247 RKWNINPSRTMMIGDRTNTDVKFGRDH 273
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 221 RRWPAHPNRVLAGVSRTHTTVKFSCDN 141
R+W +P+R + RT+T VKF D+
Sbjct: 274 RKWNINPSRTMMIGDRTNTDVKFGRDH 300
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 221 RRWPAHPNRVLAGVSRTHTTVKFSCDN 141
R+W +P+R + RT+T VKF D+
Sbjct: 264 RKWNINPSRTMMIGDRTNTDVKFGRDH 290
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 162 CCMSARNTRENTIGMSRPSATGSTEYSSN*SRRFSAGDARTISYRTSTCSRGNRRLH 332
C NT+ T S+ + ST SN R +G + + + TC R RR+H
Sbjct: 283 CSFFKSNTQLLTSSTSKTAPQTSTNIVSNCIDRRISGISASANEACRTCYRVRRRIH 339
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 240 NIPLILSPMAGSSQSCSRGCFSHSYNSK 157
N P+ L P G S SRG S+ NS+
Sbjct: 409 NAPVFLRPAVGGKVSSSRGALSNLSNSE 436
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 162 CCMSARNTRENTIGMSRPSATGSTEYSSN*SRRFSAGDARTISYRTSTCSRGNRRLH 332
C NT+ T S+ + ST SN R +G + + + TC R RR+H
Sbjct: 283 CSFFKSNTQLLTSSTSKTAPQTSTNIVSNCIDRRISGISASANEACRTCYRVRRRIH 339
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 127 PGQVQVPVSDSLQNTEAFPPAAALQEAILSLKETKHPAR 11
PG +Q P S + PP+AA + + +K P +
Sbjct: 248 PGSIQAPASQQPPASVQPPPSAASGSTVAGAQSSKEPLK 286
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/62 (24%), Positives = 24/62 (38%)
Frame = +1
Query: 181 TPARTRLG*AGHRRQDQRNIPPIDLVASVQEMPALFPTARRPVQGEIADCTIERRENKSG 360
+P R + HR+ + + LV + P PT PV + T +R + S
Sbjct: 309 SPFRALIRLRAHRQTRNQIYETVSLVEGLNGSPTPIPTVTDPVNPTVNSSTRRKRHSSSK 368
Query: 361 GS 366
S
Sbjct: 369 SS 370
>Z68341-2|CAA92765.2| 649|Caenorhabditis elegans Hypothetical
protein F01G4.4 protein.
Length = 649
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 68 GSRPAGGDSQPQR 30
GSRP GGD+ PQR
Sbjct: 459 GSRPFGGDTAPQR 471
>U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform c protein.
Length = 740
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 130 IPGQVQVPVSDSLQNTEAFPPAAALQEAILSLKETKHPA 14
+P V VP+ D +PP AA Q A+L+ + PA
Sbjct: 520 VPQFVPVPIMDPSMLQGQWPPGAAQQFAVLANDIMRVPA 558
>U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform a protein.
Length = 821
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 130 IPGQVQVPVSDSLQNTEAFPPAAALQEAILSLKETKHPA 14
+P V VP+ D +PP AA Q A+L+ + PA
Sbjct: 601 VPQFVPVPIMDPSMLQGQWPPGAAQQFAVLANDIMRVPA 639
>U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform b protein.
Length = 846
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 130 IPGQVQVPVSDSLQNTEAFPPAAALQEAILSLKETKHPA 14
+P V VP+ D +PP AA Q A+L+ + PA
Sbjct: 626 VPQFVPVPIMDPSMLQGQWPPGAAQQFAVLANDIMRVPA 664
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,131,045
Number of Sequences: 27780
Number of extensions: 192220
Number of successful extensions: 545
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -